Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2288 ATGGTGACTGTGGAGGAGATTCGTAAGGCTCAACGTTCCAATGGCCCTGCCACTATCTTGGCTTTTGGCACTGCCACTCCTTCTCACTGTGTCACTCAAGCTGAATATCCTGATTACTACTTTCGTATCACCAACAGTGAGCACATGACTGACCTTAAGGAAAAATTCAAGCGCATGTGTGAAAAATCGATGATAAAGAAACGTTACATGCACATAACAGAAGAATTTCTGAAAGAGAATCCAAACATGTGTGCATACATGGCACCATCACTAGACGCAAGACAAGATTTAGTGGTAGTGGAAGTACCAAAGCTAGGTAAAGATGCTGCAAAAAAAGCCATAGCTGAATGGGGTCAACCAAAATCCAAAATCACCCACGTAGTTTTCTGCACAACTTCTGGTGTAGACATGCCGGGTGCCGATTACCAACTCACTAAACTCTTAGGCCTAAAACCATCTGTCAAACGTCTCATGATGTATCAACAAGGTTGTTTCGCAGGCGGCACAGTTCTCCGCTTAGCGAAAGATCTTGCTGAGAATAACAAAAATGCAAGAGTTCTTGTTGTTTGTTCTGAAATCACTGCAGTTACTTTCCGTGGTCCATCAGATACTCATTTAGATTCACTTGTAGGACAGGCGCTCTTCGGTGATGGAGCCGCAGCAATGATTATTGGTGCGGATCCAGATTTAACCGTGGAGCGTCCGATTTTTGAGATTGTCTCGGCTGCTCAGACTATTCTTCCTGATTCTGATGGCGCGATTGACGGACATCTCCGTGAAGTTGGGCTCACTTTTCATCTTCTCAAAGATGTTCCTGGAATTATCTCAAAGAATATTGAAAAGAGTTTGGTTGAGGCTTTTGCACCAATTGGAATAAGTGATTGGAATTCGATCTTTTGGGTTGCACATCCAGGTGGACCGGCTATTTTAGACCAGGTTGAAGAAAAACTCCGTCTTAAGGAGGAGAAACTCCGGTCCACCCGGCACGTGCTTAGTGAATATGGAAATATGTCGAGTGCTTGTGTTTTGTTTATTTTGGATGAAATGAGAAAGAGGTCTAAGGAGGAAGGAAAGATTACAACCGGTGAAGGGTTGGAATGGGGTGTTTTGTTTGGGTTTGGACCGGGTTTAACCGTTGAGACAGTTGTGCTTCATAGTGTTCCGGTTCAGGGTTAA 1176 0.4396 MVTVEEIRKAQRSNGPATILAFGTATPSHCVTQAEYPDYYFRITNSEHMTDLKEKFKRMCEKSMIKKRYMHITEEFLKENPNMCAYMAPSLDARQDLVVVEVPKLGKDAAKKAIAEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKNARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAMIIGADPDLTVERPIFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLVEAFAPIGISDWNSIFWVAHPGGPAILDQVEEKLRLKEEKLRSTRHVLSEYGNMSSACVLFILDEMRKRSKEEGKITTGEGLEWGVLFGFGPGLTVETVVLHSVPVQG* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2288 391 PANTHER CHALCONE SYNTHASE 2 2 389 - -
Mtr7g2288 391 Pfam Chalcone and stilbene synthases, C-terminal domain 238 388 IPR012328 -
Mtr7g2288 391 SUPERFAMILY Thiolase-like 235 386 IPR016039 GO:0016746
Mtr7g2288 391 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
Mtr7g2288 391 SUPERFAMILY Thiolase-like 1 232 IPR016039 GO:0016746
Mtr7g2288 391 CDD CHS_like 16 384 - -
Mtr7g2288 391 PIRSF PKS_III 2 389 IPR011141 GO:0009058|GO:0016747
Mtr7g2288 391 Coils Coil 310 330 - -
Mtr7g2288 391 Gene3D - 236 391 IPR016039 GO:0016746
Mtr7g2288 391 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 2 389 IPR011141 GO:0009058|GO:0016747
Mtr7g2288 391 Gene3D - 1 235 IPR016039 GO:0016746
Mtr7g2288 391 Pfam Chalcone and stilbene synthases, N-terminal domain 5 228 IPR001099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2288 Mtr-Chr7 39293490 39295632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2288 57 374 Miscellaneous Gene Families AT1G04220 22.946 6.51e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2288 K00660 - gmx:100775264 723.391