Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2276 ATGATGATCAATACGGTGGTGCTATTCACCGTTTTGGTGGCTGTGATTCATGTAGTGAATTCAGAGTACATAGAATACAACATCACACAGAGGATTATCCCAGACAAAATAAACGTGCACTTGGTTCCTCACTCACATGATGATGTTGGTTGGCTTAAGACCGTTGATCAGTACTACGTTGGATCCAACAACTCCATTAGAGGTGCATGTGTGCAGAACGTGCTTGATTCTGTTATATCATCACTCTTGGAGGATCCAAATCGCAAGTTTATCTATGTTGAAATGGCATTTTTCCAGAGATGGTGGAGGCAGCAAAGTAAAGCTAAGAAACTTAAAGTCAAAGATCTTGTCAACTCGGGTCAGCTCGAATTCATAAATGGTGGTATGTGCATGCATGACGAGGCCACCCCGCATTACATTGACCTGATTGATCAGACCACTCTTGGGCATCAATTTATCAAAGATGAGTTTGGTAAGAATCCAAGAGTTGGCTGGCAGATTGATCCGTTTGGCCATTCTGCAGTTCAGGCTTACTTGCTTGGAGCTGAGCTAGGATTCGATTCACTCTTTTTTGCTAGAATTGATTACCAAGATAGAGCCAAACGATTAAAGGAGAAAACTCTAGAGGTTGTTTGGCAAGGTTCCAGGTCCCTTGGTTCTTCTTCACAAATATTTACTGGGATATTTCCCAGGCATTATGATCCTCCTGATGGATTCACGTTTGAGATAAATGATGTTTCCCAACCTATTCAGGATGACGTTCTACTGTTTGACTATAATGTTGAAGAAAGAGTCAATGACTTTGTATCTGCTGCCTTGGCTCAGGCTAATGTGACCAGGACGAATCACATAATGTGGGCAATGGGGACAGACTTCCGCTATCAATATGCTAATTCATGGTTTAGGCAGATGGATAAGTTTATTCACTATGTCAATCAGGATGGTCGAGTCAATGCATTGTATTCAACACCATCTATCTACACTGATGCAAAATATGCAGCTAATGAGCAGTGGCCTCTTAAAATTGATGATTTCTTCCCGTATGCTGATCATCCAAATGCATATTGGACTGGTTATTTTACAAGTAGGCCAGCTTTAAAGGGTTACGTGAGAACAATGAGTGGTTATTATCAGGCAGCAAGGCAGTTGGAATTTTTTAAAGGGAGGAATGAATCAGGACCAAATACCGACGCATTAGCTGATGCTTTAGCGCTTGCTCAGCACCATGATGCTGTTAGTGGGACAGAAAGACAGCATGTTGCTGCTGATTATGCAAAGCGGATTTCAATAGGCTATGACGAGGCAGAAAGCTTGGTTGCATCTGTACTTGCTTTATTGGTAAACCAAAAATCAAGTTCGCATGTGATAAACCCAGTAACAGGCTTCCAGCAGTGCCCTCTCCTTAATATAAGCTACTGTCCTCCGTCAGAAGCTACCTTGGCTAATGGAAAAAGCATGGTGATTGTTGTTTACAATCCTCTTGCTTGGAAGAGGGAGGAAGTGATTCGAATTCCTGTTTCCACTGCAGAGGTTTTTGTCCAGGACTCTTCTGGGAAGGAAATTGAGTCTCAGCTTCTGCCTATATCTAATATCACTTTGAGCATAAGAAAAAAATATGTCAAAGCATATGTAGGAACAGCCCCTGCTGGGGACCTCAAGTATTGGCTTGCATTTCCAGTATCGGTACCTCCCATTGGTTTCGGCACCTATGTAGTATCAAGTCCTAAACATACGGGTCATATTTCAACTATCTCAACGGAGTTCAGATCAGAAGAAAGTACTAATAATAGCATAGAAGTTGGACAAGGGAATTTAAAGCTGCTTTATTCTGCAGATGAAGGAAAATTGACTCAGTATGTTAACAATAGAAATCTAGTTACAACATCAGTTGAACAATCATACAGCTTTTATTCTGGATACGTTGGGGATGATAAAGATTCTCAGGCTTCTGGGGCATACGTCTTCCGTCCAAATGGCTCGTTTCCCATTAAATCTGATCAGCAGGCATCTTTTACTGTCCTGCGTGGTCCGATATTGGATGAAGTACATCAACAGATCAATCCATGGGCATCTCAGATTGTGAGGATATATAAGGAAAAGGAGCATGCTGAAGTTGAGTTCACAATTGGGCCTATACCTGTGGATGATGGCCTTGGCAAAGAAGTTATTACTCAATTTTCAACTACAATGACGACCAACAAGACATTCTACACAGATTCTAATGGACGTGACTTCATTAAAAGGATTCGAGATTTCAGGACTGATTGGGATCTAGAAGTGAACCAACCCGTAGCTGGAAACTATTACCCAGTTAATTTAGGAGTATATTTGCAAGATAGCGATATAGAACTCTCGGTCTTGGTGGACCGCTCAGTTGGGGGTTCCAGTTTGGTAGATGGTCAAATAGAGTTGATGCTCCACAGGAGGATGCTTCATGATGATGTAAGAGGTGTTGGAGAGATACTTAATGAAACTGTTTGCATTGCTGATAAATGTGAAGGCTTAACTATACAAGGAAAACTGTTCCTTAGAATTGACCGTAAAGGTGAGGGTGCTAAATGGCGTCGTACACTTGGCCAGGAATTATATTCACCGTTGCTGTTGGCTTTCACGGAGCAGGATGAGGATAATTGGTTGCATTCAAAAAAACCAACATTTTCTGGCATAGACTCTTCCTACAGTTTACCAAACAACACTGCTCTTCTAACTCTGCAGGAATTTGGAAATGGAAAAGTACTCTTAAGACTGGCTCACCTTTATGAGGTTGGAGAGGACAAAGATTATTCGGTAACTGCAAATGTAGAATTGAAAAAACTTTTCCCTAACAAGAAGATAAGTAAAGTGACAGAGATGAGTTTGTCTGCCAATCAAGAAAGAGCTGAAATGGAAAAGAAGAGATTAGTTTGGAAGGTAGAAGGCTCCAGTGAAGAGTCTAAGGTGGTGAGGGGAGGACCAGTTGATCCTGCAAAGCTGGTTGTTGAACTTGTTCCAATGGAAATTCGGACATTCTTTGTTGACTTTAATCCCCTTCAAACAGTTCCTGCAGCAGAAAAGCATGTAGCAATCTAG 3069 0.4148 MMINTVVLFTVLVAVIHVVNSEYIEYNITQRIIPDKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIRGACVQNVLDSVISSLLEDPNRKFIYVEMAFFQRWWRQQSKAKKLKVKDLVNSGQLEFINGGMCMHDEATPHYIDLIDQTTLGHQFIKDEFGKNPRVGWQIDPFGHSAVQAYLLGAELGFDSLFFARIDYQDRAKRLKEKTLEVVWQGSRSLGSSSQIFTGIFPRHYDPPDGFTFEINDVSQPIQDDVLLFDYNVEERVNDFVSAALAQANVTRTNHIMWAMGTDFRYQYANSWFRQMDKFIHYVNQDGRVNALYSTPSIYTDAKYAANEQWPLKIDDFFPYADHPNAYWTGYFTSRPALKGYVRTMSGYYQAARQLEFFKGRNESGPNTDALADALALAQHHDAVSGTERQHVAADYAKRISIGYDEAESLVASVLALLVNQKSSSHVINPVTGFQQCPLLNISYCPPSEATLANGKSMVIVVYNPLAWKREEVIRIPVSTAEVFVQDSSGKEIESQLLPISNITLSIRKKYVKAYVGTAPAGDLKYWLAFPVSVPPIGFGTYVVSSPKHTGHISTISTEFRSEESTNNSIEVGQGNLKLLYSADEGKLTQYVNNRNLVTTSVEQSYSFYSGYVGDDKDSQASGAYVFRPNGSFPIKSDQQASFTVLRGPILDEVHQQINPWASQIVRIYKEKEHAEVEFTIGPIPVDDGLGKEVITQFSTTMTTNKTFYTDSNGRDFIKRIRDFRTDWDLEVNQPVAGNYYPVNLGVYLQDSDIELSVLVDRSVGGSSLVDGQIELMLHRRMLHDDVRGVGEILNETVCIADKCEGLTIQGKLFLRIDRKGEGAKWRRTLGQELYSPLLLAFTEQDEDNWLHSKKPTFSGIDSSYSLPNNTALLTLQEFGNGKVLLRLAHLYEVGEDKDYSVTANVELKKLFPNKKISKVTEMSLSANQERAEMEKKRLVWKVEGSSEESKVVRGGPVDPAKLVVELVPMEIRTFFVDFNPLQTVPAAEKHVAI* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2276 1022 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 899 1004 IPR041147 -
Mtr7g2276 1022 Gene3D - 883 1009 - -
Mtr7g2276 1022 SMART Alpha_mann_mid_2 354 428 IPR015341 GO:0004559|GO:0006013
Mtr7g2276 1022 Pfam Alpha mannosidase middle domain 354 446 IPR015341 GO:0004559|GO:0006013
Mtr7g2276 1022 Gene3D - 474 598 IPR013780 -
Mtr7g2276 1022 SUPERFAMILY Families 57/38 glycoside transferase middle domain 354 456 IPR028995 -
Mtr7g2276 1022 Gene3D Glycoside hydrolase 38, N terminal domain 37 317 IPR027291 -
Mtr7g2276 1022 PANTHER ALPHA-MANNOSIDASE 10 1011 - -
Mtr7g2276 1022 CDD GH38N_AMII_LAM_like 37 313 - -
Mtr7g2276 1022 Pfam Glycosyl hydrolases family 38 C-terminal domain 602 816 IPR011682 GO:0004559|GO:0006013
Mtr7g2276 1022 Gene3D - 599 864 - -
Mtr7g2276 1022 Gene3D Glycoside hydrolase family 38, central domain 397 453 IPR037094 GO:0004559|GO:0006013
Mtr7g2276 1022 Gene3D Glycoside hydrolase family 38, central domain 318 396 IPR037094 GO:0004559|GO:0006013
Mtr7g2276 1022 Pfam Glycosyl hydrolases family 38 N-terminal domain 38 349 IPR000602 GO:0004559|GO:0006013
Mtr7g2276 1022 PANTHER ALPHA-MANNOSIDASE 10 1011 - -
Mtr7g2276 1022 SUPERFAMILY Glycoside hydrolase/deacetylase 26 352 IPR011330 GO:0005975
Mtr7g2276 1022 SUPERFAMILY Galactose mutarotase-like 456 1007 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2276 Mtr-Chr7 39154615 39164456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2276 1 947 Glycoside Hydrolase AT3G26720 73.734 0.0 1476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2276 K01191 - gmx:100795651 1775.76