Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2275 ATGATAACCAAGTGGAAGTACCCATCTTTCATTCTGCCACATAGATTCACAAAAGATTCTATTTTTAGCAATAGTAACGTTTTTCTGTTTCTGGGGTGTGAAGAGTTCACTCCACTCGTCATTTTTCATCACCCAATGGAGAAAAAATTGATCTTTGTGGTGACCCTTTTGGGATTTCTCTTCTATGGAGGAGAATCCAAGTTTATAGAGTATAACACCTCACAGGGTGTAGTCTCTGGGAAGCTCAATGTTCATCTGGTTGCTCATACTCATGATGATGTTGGGTGGTTGAAGACTGTTGATCAGTACTATGTTGGTTCCAACAATTCTATTCAGGGTGCTTGTGTGCAGAATGTGTTGGATTCTATGGTTCATGCTCTATTGGCTGATAAGAACAGGAAATTTATCTATGTGGAGATAGCCTTTTTTCAGCGATGGTGGGATGATCAGAGTGAAGCTGTTAAGAATATAGTTAAGCAGCTTGTTAGTTCGGGTCAACTAGAGTTCATAAACGGTGGCATGTGTATGCATGATGAGGCAGTAGTTCATTACATAGACATGATTGATCAGACTACACTTGGACACCGATTTCTGAAAGAGGAGTTCGATTTGACTCCAAGAATTGGTTGGCAAATTGACCCGTTTGGACATTCTGCTGTGCAGGCTTATTTATTGGGAGCTGAAGTTGGCTTTGATTCACTTTTCTTTGGTAGGATCGATTACCAAGATAGGAATAAACGCAAAAAGGAGAAGAGTCTTGAGGTTATCTGGCAAGGTAGCAAGAGCCTCGGTTCATCTGCTCAGATCTTTGCTGGTGCATTCCCTGAGAACTATGAACCTCCTTCTGGATTTTACTTTGAAGTGAATGATGATTCACAAATAGTTCAAGATAACATGAATTTGTTTGATTACAATGTGCAAGATAGAGTGAATGACTTTGTTGCTGCTGCATTGTCACAAGCAAACATAACTCGGACAAATCACATTATGTGGACAATGGGAACTGATTTTAAGTATCAATACGCACATACATGGTACCGACAGTTGGACAAGCTCATTCATTACGTGAACAAGGATGGACGTGTCAATGCTCTGTACTCTACACCCTCCATATATACAGATGCAAAATATGCTGCAAATGAGTCATGGCCAATCAAGACTGACGATTTCTTCCCTTATTCAGATCGTGCAAATGGTTTCTGGACAGGATACTTTACCAGTAGACCAGCTTTGAAACGCTATGTCAGATTAATGAGTGGCTATTATTTGGCTGCAAGACAGTTAGAATATTTTAGAGGGCGAAAGAAGTCAGGGCCAAATACAGACTCGTTAGCTGATGCTTTAGCAATTGCTCAACACCATGATGCAGTCACCGGCACAGAAAAGCAGCATGTGGCCAATGATTATGCTAAACGATTGGCAATAGGCTACAAGGAGGCAGAGGAACTGGTTTCGTCATCACTGGCATGCTTGGTTGAATCAACATCAGTTACTGGATGTCATAACCCAGTTATAAAGTTTCAACAATGTCCGCTTTTGAACATAACTTATTGTCCTGCATCAGAAGTTGAACTGGTTCAAGGAAAGAGTTTGGTTATTGTGGTTTATAACTCTCTTGGTTGGAAGAGGAATGAAGTGATTCGAATTCCTGTTATTGATGGTGATGTTACAGTTCATGACTCCAAAGGTGTAGAAATAGAATCTCAAATTCTACCTCTGGCTGAGGTATTTGTAGACCTAAGAAACTACTATGTCAAGGCATATTTAGGACAAAATCCATCCAAGACACCCAAGTATTGGCTTGCATTTTCAGTTTCTGTACCACCATTTGGTTTTAGCACTTACACTGTCTCGACTGCCAAAAAAACAGGTTCCACCAGATCATCAGTTTATACACTTCAAAGTCATGAAAAGTCTTCAATAGGTCAAGGAAATTTGAAGCTTACATTTTCTACAGATCAACAAAAACATACCAATTATGTTAATGCAAGAAACATGGTTGAGGAACAAGTTGAAGTGAGTTACCTTTACTATTCAGGGTATAATGGAACTGATCAAAAAGATCCACAGAATGCTGGAGCTTATATCTTCCGTCCAAATGGAACACATCTTATAAACCATGAAAGACAGGTTCCAGTGACTGTTCTCCATGGACCAATACTAGATGAAGTGCATCAACGAATCAATCCATGGATATATCAGATTACCAGACAGTACAAAGAAAAGGAACATGTTGAAGTAGAGTTTATTGTTGGTCCTATACCTATTGAAGATGGAGTTGGTAAAGAAGTTTCCACTCGGATTTCAACTACTATGGAAACCAATAAAACTTTTTACACAGATTCTAATGGGCGTGATTTTATCAAAAGGGTACGTGACTACAGAACAGACTGGGACTTGGAAGTGCACCAGCCCGTTGCTGGAAATTATTACCCAATTAATCTTGGGATATACGTAGAAGATGATAAGACAGAATTTTCAGTTTTGGTGGATAGAGCTATAGGAGGATCCAGCTTAGGAGATGGACAAATCGAGTTGATGCTCCACAGGAGATTGCTGCTTGATGATTCTAGAGGTGTTGCAGAGGCCTTAAATGAAACAGACTGTGTTGCTGACAATTGCAAGGGTCTAACTGTCCAAGGGAAATATTATTATAGAATAGACCCCTTGGGTGAGGGAGCTAAATGGCGCCGTACATTTGGCCAGGAAATATATTCTCCGCTTTTGCTAGCCTTTTCCGAAAAGGATGATAAAGATGATGACTGGACGAATACCCATGTAACAACATTTTCAGGATTTGATTCTTCTTACACATTACCAGAAAATATTGTTATTATAACATTACAGGAACTTGATCACGGGACAGTTCTCCTTCGATTAGCGCATTTATATGAGATCGAAGAAGACAAGGATCTCTCTGTAGTGACAAGTGTGGAGTTGAAAAAGCTTTTCCCAGGAAAGAAGATCAAAGAAGTGAAAGAAATGAGCTTATCTGCAAATCAAGAAAGGACAGAGATGGAGAAGAAGAGACTTGTTTGGAAAGTAGAAGGATCTTCTGGAAATGAAGGTGTTTCAAGGGGAGGTTCAGTTGATCCAAAAGAGCGAACTGTGGAGCTTGCTCCAATGGAAATCCGCACTTTCACCATTTACTTTGATAGTAGTAACCATCTTTTTGATGCTTTGTAG 3186 0.3977 MITKWKYPSFILPHRFTKDSIFSNSNVFLFLGCEEFTPLVIFHHPMEKKLIFVVTLLGFLFYGGESKFIEYNTSQGVVSGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSMVHALLADKNRKFIYVEIAFFQRWWDDQSEAVKNIVKQLVSSGQLEFINGGMCMHDEAVVHYIDMIDQTTLGHRFLKEEFDLTPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFGRIDYQDRNKRKKEKSLEVIWQGSKSLGSSAQIFAGAFPENYEPPSGFYFEVNDDSQIVQDNMNLFDYNVQDRVNDFVAAALSQANITRTNHIMWTMGTDFKYQYAHTWYRQLDKLIHYVNKDGRVNALYSTPSIYTDAKYAANESWPIKTDDFFPYSDRANGFWTGYFTSRPALKRYVRLMSGYYLAARQLEYFRGRKKSGPNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYKEAEELVSSSLACLVESTSVTGCHNPVIKFQQCPLLNITYCPASEVELVQGKSLVIVVYNSLGWKRNEVIRIPVIDGDVTVHDSKGVEIESQILPLAEVFVDLRNYYVKAYLGQNPSKTPKYWLAFSVSVPPFGFSTYTVSTAKKTGSTRSSVYTLQSHEKSSIGQGNLKLTFSTDQQKHTNYVNARNMVEEQVEVSYLYYSGYNGTDQKDPQNAGAYIFRPNGTHLINHERQVPVTVLHGPILDEVHQRINPWIYQITRQYKEKEHVEVEFIVGPIPIEDGVGKEVSTRISTTMETNKTFYTDSNGRDFIKRVRDYRTDWDLEVHQPVAGNYYPINLGIYVEDDKTEFSVLVDRAIGGSSLGDGQIELMLHRRLLLDDSRGVAEALNETDCVADNCKGLTVQGKYYYRIDPLGEGAKWRRTFGQEIYSPLLLAFSEKDDKDDDWTNTHVTTFSGFDSSYTLPENIVIITLQELDHGTVLLRLAHLYEIEEDKDLSVVTSVELKKLFPGKKIKEVKEMSLSANQERTEMEKKRLVWKVEGSSGNEGVSRGGSVDPKERTVELAPMEIRTFTIYFDSSNHLFDAL* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2275 1061 Gene3D Glycoside hydrolase 38, N terminal domain 82 362 IPR027291 -
Mtr7g2275 1061 SUPERFAMILY Families 57/38 glycoside transferase middle domain 399 498 IPR028995 -
Mtr7g2275 1061 CDD GH38N_AMII_LAM_like 82 358 - -
Mtr7g2275 1061 PANTHER ALPHA-MANNOSIDASE 58 1054 - -
Mtr7g2275 1061 Pfam Alpha mannosidase middle domain 400 491 IPR015341 GO:0004559|GO:0006013
Mtr7g2275 1061 SUPERFAMILY Galactose mutarotase-like 500 1051 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mtr7g2275 1061 SMART Alpha_mann_mid_2 399 473 IPR015341 GO:0004559|GO:0006013
Mtr7g2275 1061 Gene3D - 927 1056 - -
Mtr7g2275 1061 Pfam Glycosyl hydrolases family 38 C-terminal domain 642 858 IPR011682 GO:0004559|GO:0006013
Mtr7g2275 1061 Gene3D Glycoside hydrolase family 38, central domain 442 497 IPR037094 GO:0004559|GO:0006013
Mtr7g2275 1061 SUPERFAMILY Glycoside hydrolase/deacetylase 71 395 IPR011330 GO:0005975
Mtr7g2275 1061 Coils Coil 989 1009 - -
Mtr7g2275 1061 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 942 1047 IPR041147 -
Mtr7g2275 1061 Pfam Glycosyl hydrolases family 38 N-terminal domain 83 394 IPR000602 GO:0004559|GO:0006013
Mtr7g2275 1061 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Mtr7g2275 1061 Gene3D - 519 640 IPR013780 -
Mtr7g2275 1061 PANTHER ALPHA-MANNOSIDASE 58 1054 - -
Mtr7g2275 1061 Gene3D Glycoside hydrolase family 38, central domain 363 441 IPR037094 GO:0004559|GO:0006013
Mtr7g2275 1061 Gene3D - 641 906 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2275 Mtr-Chr7 39141503 39150449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2275 46 965 Glycoside Hydrolase AT5G13980 71.659 0.0 1399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2275 K01191 - gmx:100776282 1757.65