Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2267 ATGCTCAGAACTCTAGCCAGGGAGTTGAAGCTCACCAACTTCAGCAATGGTTTGGTTAAAAAACGCAGCAGCAGATTCTATGCAACGGTTGGTGGAAGAAGGTTAGAAGGAAAAATTGCAATCATAACTGGATCAGCAAGTGGACTTGGTAAAGCAACAGCCCATGAATTTGTCCAACATGGGGCCCAAGTAATCATCGCCGACAACGACACTCAACTTGGGCCAAAAGTTGCAAAAGAATTGGGCCATTCAGCCCAGTATGTGGAATGTGATGTCACTGTTGAGGCCCAAGTAGAAGAAGCAGTGAACTTTGCCATAACAAACTATGGTAAACTAGACATCATGTACAACAATGCTGGCATAACAGGACCAGTAATCCCACCAAGCATAACAGAATTGGACCTTGATGAATTTGAGAAGGTCATGAGAATCAATGTAACAGGAGTTATTGCAGGTATAAAACATGCGGCTCGAGTGATGATACCAAAGGGCTATGGGTCCATAATATGTACATCAAGCATAAGTGGGCTATTTGGTGGGCTTGGGCCTCATCCTTACACAATATCAAAGTCTACAATACCTGGGGTGGTGAAATCTGTGGCTAGTGAACTATGTGGAGCTGGGATTAGAGTCAATTGCATATCACCAACTGCAATTCCTACACCAATGTCATTGTATCAAATTGGAAAGTTTATTCCTGGTGTGACCTATGAACAGATAGGGGAAATTGTTAGTGGACTTAGTGCTCTCAAAGGTGCCAAATGTGAGGACATTGATGTTGCTAGAGCTGCATTGTACTTGGCATCAGATGATGCTAAGTTTATCTCAGGTCAGAATCTCATAGTTGATGGAGGGTTCACTTCCATAAAAAATTTCGCGTTTCCTTCTCCGGATCAAATCGGCTAG 906 0.4305 MLRTLARELKLTNFSNGLVKKRSSRFYATVGGRRLEGKIAIITGSASGLGKATAHEFVQHGAQVIIADNDTQLGPKVAKELGHSAQYVECDVTVEAQVEEAVNFAITNYGKLDIMYNNAGITGPVIPPSITELDLDEFEKVMRINVTGVIAGIKHAARVMIPKGYGSIICTSSISGLFGGLGPHPYTISKSTIPGVVKSVASELCGAGIRVNCISPTAIPTPMSLYQIGKFIPGVTYEQIGEIVSGLSALKGAKCEDIDVARAALYLASDDAKFISGQNLIVDGGFTSIKNFAFPSPDQIG* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2267 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 110 121 IPR002347 -
Mtr7g2267 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 174 IPR002347 -
Mtr7g2267 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 205 IPR002347 -
Mtr7g2267 301 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 6 298 - -
Mtr7g2267 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 36 287 IPR036291 -
Mtr7g2267 301 PANTHER ALCOHOL DEHYDROGENASE-LIKE PROTEIN 6 298 - -
Mtr7g2267 301 Gene3D - 28 294 - -
Mtr7g2267 301 PRINTS Glucose/ribitol dehydrogenase family signature 39 56 IPR002347 -
Mtr7g2267 301 PRINTS Glucose/ribitol dehydrogenase family signature 110 121 IPR002347 -
Mtr7g2267 301 PRINTS Glucose/ribitol dehydrogenase family signature 160 176 IPR002347 -
Mtr7g2267 301 PRINTS Glucose/ribitol dehydrogenase family signature 186 205 IPR002347 -
Mtr7g2267 301 PRINTS Glucose/ribitol dehydrogenase family signature 207 224 IPR002347 -
Mtr7g2267 301 PRINTS Glucose/ribitol dehydrogenase family signature 250 270 IPR002347 -
Mtr7g2267 301 Pfam Enoyl-(Acyl carrier protein) reductase 44 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2267 Mtr-Chr7 39068545 39072500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2267 35 287 Acyl Lipid Metabolism Gene Families AT1G63380 30.451 2.02e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2267 - - cam:101504238 519.235