Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1946 ATGTGGAAGGTTACGCGATTCGCCGCATCATCGCGATCGCGGTTGTTCTCGACGGCGATACCTGCACCGTGTATGGTTCATAAACGTGGTGCTGATATTCTTCATGATCCTTGGTTCAATAAGGATACAGGATTTCCTTTAACTGAAAGAGATCGTTTGGGTCTTCGAGGCCTCCTTCCTCCTCGTATCATTTCATTTCAGGAGCAATATGACCGTTTTATGAGCTCATATAGATCATTGGAGAAGAATACCCATGGCCAGTCAGATAAAATTGTTTCCTTATCCAAATGGAGGATCTTAAATAGACTACATGACAGGAATGAGACATTGTACTATAGAGCACTTATTGATAACATCAAAGAATTTGCTCCAATAATTTATACTCCTACAGTTGGGTTAGTGTGTCAAAATTATTGTGGGTTATATAGACGCCCACGTGGAATGTATTTTAGTGCCAAAGATAAAGGAGAGATGATGTCAATGATCTATAACTGGCCAGCTCCTCAGGTAGACATGATTGTCTTGACAGATGGTAGTCGTATTCTTGGGTTAGGTGACCTTGGAGTTCAGGGCATTGGAATACCTGTAGGAAAACTTGATATGTATGTTGCAGCTGCTGGTATCAACCCACAAAGAATACTTCCGATCATGCTGGATGTTGGAACAAACAATCAAAAGCTACTTGATGATCGCCTTTATTTAGGACTTCGACAACCTAGGTTGGAAGGTGAAGAGTATCTGTCTATTGTGGATGAATTCATGGAAGCTGTTCACGCACGGTGGCCGAAGGCTATTGTGCAGTTTGAGGATTTCCAAATGAAGTGGGCTTTTGAAACCCTGAAACGATATCGCCATAAGTTTTGCATGTTTAATGATGATATACAGGGCACAGCTGGTGTTGCACTTGCTGGACTACTGGGAACTGTAAGAGCCCAAGGTCGACCGTTGTCTGATTTTGCAAAACAAAAGATAGTTATAGTTGGAGCTGGGAGTGCAGGGCTTGGCGTTCTTAACATGGCTGTCCAAGCAGTTTCAAGGATGTCAGGGTGCAGCGAAACAGCTGCAAAAAGTCAATTTTTCTTAATTGATAAAAATGGTCTTGTCACGACAGAAAGGAGTAATCTAGATCCAGCTGCAGTTCCATTTGCTAAAAATCCAAGAGACCTTGAAGGGCTTGCAGAGGGTGCTAGTATCATTGAAGTGGTTAAGAAGGTTAAGCCACATGTGCTGCTTGGATTGTCTGGGGTTGGTGGTGTCTTTAATGAGCAGGTTCTTAAGGCAATGAGAGAATCTGTTTCAACAAAACCGGCTATCTTTGCCATGTCTAATCCCACTATGAATGCTGAGTGTACTGCTATTGATGCATTTAATCATGCTGGAGAAAACATAGTGTTTGCAAGTGGAAGCCCTTTTGAAAATGTAGATCTTGGAAATGGAAGAGCTGGCCATGTAAATCAAGCCAACAACATGTACCTGTTTCCAGGGATTGGCTTGGGATCACTTCTGTCTGGTGCTCATCATATAACAGATGGAATGTTGCAGGCAGCATCTGAATGCCTTGCTTCATACATGACAGAGGAAGATATCCAAAAAGGAATCTTGTATCCATCCATTGATTGTATACGAAATGTTACAGCAGAGGTCGGGGCTGCTGTTCTACGTGCAGCAATTGCTGAAGGACTGGCTGAAGGACACGGGGGTGTTGGGTCCAAAGAACTTGAACATATGTCAGAAGATGATACTGTGGAGTATGTCAGAGGAAATATGTGGTACCCTGAGTATTGCCCTCTTGTTCATGAAAAATGA 1806 0.4275 MWKVTRFAASSRSRLFSTAIPAPCMVHKRGADILHDPWFNKDTGFPLTERDRLGLRGLLPPRIISFQEQYDRFMSSYRSLEKNTHGQSDKIVSLSKWRILNRLHDRNETLYYRALIDNIKEFAPIIYTPTVGLVCQNYCGLYRRPRGMYFSAKDKGEMMSMIYNWPAPQVDMIVLTDGSRILGLGDLGVQGIGIPVGKLDMYVAAAGINPQRILPIMLDVGTNNQKLLDDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLKRYRHKFCMFNDDIQGTAGVALAGLLGTVRAQGRPLSDFAKQKIVIVGAGSAGLGVLNMAVQAVSRMSGCSETAAKSQFFLIDKNGLVTTERSNLDPAAVPFAKNPRDLEGLAEGASIIEVVKKVKPHVLLGLSGVGGVFNEQVLKAMRESVSTKPAIFAMSNPTMNAECTAIDAFNHAGENIVFASGSPFENVDLGNGRAGHVNQANNMYLFPGIGLGSLLSGAHHITDGMLQAASECLASYMTEEDIQKGILYPSIDCIRNVTAEVGAAVLRAAIAEGLAEGHGGVGSKELEHMSEDDTVEYVRGNMWYPEYCPLVHEK* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1946 601 Pfam Malic enzyme, N-terminal domain 104 284 IPR012301 GO:0004471
Mtr7g1946 601 PANTHER MALIC ENZYME-RELATED 4 597 - -
Mtr7g1946 601 PRINTS Malic enzyme signature 110 134 IPR001891 GO:0004470|GO:0004471
Mtr7g1946 601 PRINTS Malic enzyme signature 170 199 IPR001891 GO:0004470|GO:0004471
Mtr7g1946 601 PRINTS Malic enzyme signature 206 228 IPR001891 GO:0004470|GO:0004471
Mtr7g1946 601 PRINTS Malic enzyme signature 265 283 IPR001891 GO:0004470|GO:0004471
Mtr7g1946 601 PRINTS Malic enzyme signature 290 306 IPR001891 GO:0004470|GO:0004471
Mtr7g1946 601 PRINTS Malic enzyme signature 324 340 IPR001891 GO:0004470|GO:0004471
Mtr7g1946 601 PRINTS Malic enzyme signature 433 449 IPR001891 GO:0004470|GO:0004471
Mtr7g1946 601 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 14 293 IPR046346 -
Mtr7g1946 601 Gene3D - 292 601 - -
Mtr7g1946 601 SMART Malic_M_2 294 557 IPR012302 GO:0051287
Mtr7g1946 601 SMART malic_2 104 284 IPR012301 GO:0004471
Mtr7g1946 601 PANTHER MALIC ENZYME 4 597 - -
Mtr7g1946 601 CDD NAD_bind_1_malic_enz 294 592 - -
Mtr7g1946 601 Pfam Malic enzyme, NAD binding domain 294 557 IPR012302 GO:0051287
Mtr7g1946 601 PIRSF ME 3 600 IPR001891 GO:0004470|GO:0004471
Mtr7g1946 601 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 294 598 IPR036291 -
Mtr7g1946 601 ProSitePatterns Malic enzymes signature. 290 306 IPR015884 GO:0004471
Mtr7g1946 601 Gene3D - 28 291 IPR037062 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1946 Mtr-Chr7 35574660 35581430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1946 K00028 - gmx:100795823 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1946 7 35574660 35581430 Mtr7g1946 7 35574660 35581430 ECH
Mtr7g1946 7 35574660 35581430 Mtr8g0997 8 12074211 12083646 PCT