Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0703 ATGCGGTCAATATATCGTCTTGTTGTTCGTGATCGCTTTGGCATATGTTATATGGCTCTGGCGTCGAGAACTTTATTTTCTTCTATAACAACATATCACCCTGCAGAAGCTGGAGACTTTTGGCATAAAGAACAAACTCAAGACCTTACGAGATCTGTGGACATTCTTACTACAAAAATTGGCAAAGGTAACAACGAGGACGACATTCTCCAATCTCTAATCAGTGATGAAGGAGTAAATGGCATACATTTGTCTGAAAACCTCATTAATAGGTTGCTATTTCGATATAAGGATGATTGGAAGTCTGCATTGGCGATATTCAGATGGGCCAGTTCACATTCAAACTTTAAACATTCGCAACAATCGTATGATATGATGGTAGATATATTGGGTAGAATGAAGGCGATGGACAAGATGAGAGAGATCTTAGAAGAAATGCGTCAGGAGAGTCTCATCACTCTCGATACCATAGCCAAGGTAATGAGAAGGTTTGTTGGGGCAAGACAGTGGAAAGATGCTGTGAGGATATTTGATGACTTGCAATTTCTCGGCTTGGAGAAGAATACAGAATCCATGAATGTGTTGCTTGATACTCTATGTAAAGAGAAATTTGTTGAACAAGCTCGTGAAATTTACTTGGAGCTGAAGCATTACATTGCTCCAAATGCTCACACGTTTAACATACTTATTCATGGATGGTGTAATATCCGACGTGTTGAAGAGGCACATTGGACAATCCAAGAGATGAAAGGATATGGTTGTCGCCCTTGCGTTATAAGTTATTCCACCATCATTCAATGTTATTGTCAAGAACAGAATTTCGACAGGGTTTATGATCTTCTCGATGAAATGCAAGCTCAAAATTGCTCCCCAAATGTGGTCACATATACTACTATAATGTGCGCACTCGCAAAAGCAGAGAAATTTGACGAAGCTTTACAAGTTGTCGAAAGAATGAATGCTGTTGGATGTAGGCCTGATACGCTCTTTTTCAATTCGTTCATTTATACGTTGGGGAGAGCAGGCAGAATAGATGATGCTACATATGTATTCAAGGTTGCGATGCCGAAGGCCAATGTGGCCCCAAATACATCGACCTATAACTCAATGGTTTCTATGTTTTGTTACTATGCACGTGAAGAGAGAGCTTTTGGAATACTGAAGGAGATGGAAAAATCAGGTCTTTGTAAGCCGGATATTCAGACTTTTCACCCATTGATCAAGTCATGCTTTAAAATGAGAGAAATAGATACTTGGTTGAATGATATATTAAATGATATGGTAAATAAATATCAGATTGGTCTTGACCTTTCAACCTATTCATTGCTAATTCATGGGCTTTGCAGAGCAGATAGATGCAAGTGGGCATTCGATCTGTTCGAGGAGATGGTTGATCAAGATATCGTGCCTAGATACAAAACTTGCCGTTTGCTCTTGGATGAAGTCAAACAGAAAAATATGTATCAAGCTGTTGACAAAATTGATGTTCTTATGAAGAAACTTTAA 1506 0.3884 MRSIYRLVVRDRFGICYMALASRTLFSSITTYHPAEAGDFWHKEQTQDLTRSVDILTTKIGKGNNEDDILQSLISDEGVNGIHLSENLINRLLFRYKDDWKSALAIFRWASSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEMRQESLITLDTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFDEALQVVERMNAVGCRPDTLFFNSFIYTLGRAGRIDDATYVFKVAMPKANVAPNTSTYNSMVSMFCYYAREERAFGILKEMEKSGLCKPDIQTFHPLIKSCFKMREIDTWLNDILNDMVNKYQIGLDLSTYSLLIHGLCRADRCKWAFDLFEEMVDQDIVPRYKTCRLLLDEVKQKNMYQAVDKIDVLMKKL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0703 501 Gene3D Tetratricopeptide repeat domain 57 206 IPR011990 GO:0005515
Mtr7g0703 501 Pfam PPR repeat family 256 305 IPR002885 -
Mtr7g0703 501 Pfam PPR repeat family 187 235 IPR002885 -
Mtr7g0703 501 Pfam PPR repeat family 362 411 IPR002885 -
Mtr7g0703 501 Gene3D Tetratricopeptide repeat domain 216 286 IPR011990 GO:0005515
Mtr7g0703 501 Gene3D Tetratricopeptide repeat domain 287 354 IPR011990 GO:0005515
Mtr7g0703 501 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 292 326 IPR002885 -
Mtr7g0703 501 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 363 397 IPR002885 -
Mtr7g0703 501 Gene3D Tetratricopeptide repeat domain 355 501 IPR011990 GO:0005515
Mtr7g0703 501 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 436 470 IPR002885 -
Mtr7g0703 501 Pfam PPR repeat 436 464 IPR002885 -
Mtr7g0703 501 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 327 362 IPR002885 -
Mtr7g0703 501 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL 23 501 - -
Mtr7g0703 501 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 257 291 IPR002885 -
Mtr7g0703 501 TIGRFAM PPR: pentatricopeptide repeat domain 224 256 IPR002885 -
Mtr7g0703 501 TIGRFAM PPR: pentatricopeptide repeat domain 331 363 IPR002885 -
Mtr7g0703 501 TIGRFAM PPR: pentatricopeptide repeat domain 259 293 IPR002885 -
Mtr7g0703 501 TIGRFAM PPR: pentatricopeptide repeat domain 294 328 IPR002885 -
Mtr7g0703 501 TIGRFAM PPR: pentatricopeptide repeat domain 366 399 IPR002885 -
Mtr7g0703 501 TIGRFAM PPR: pentatricopeptide repeat domain 439 470 IPR002885 -
Mtr7g0703 501 Pfam PPR repeat 122 149 IPR002885 -
Mtr7g0703 501 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 222 256 IPR002885 -
Mtr7g0703 501 PANTHER OS02G0601600 PROTEIN 23 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0703 Mtr-Chr7 10880722 10883328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0703 169 494 Miscellaneous Gene Families AT4G11690 23.952 2.66e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0703 - - cam:101498834 754.592