Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2208 ATGAAAGCTTCATTACGCAGTGCTACTCCACTTGCTCTAATTTCACCTAACCAACTACTCAATGCATCCACTCCTGGGGATAAATATTTTGGTTTCAAATATAGCAAGGATAGGAGTACTGTAATGACAATGGTAGCTAGTGGAAAAGGTGGTGGTTTGTTGGAGAAACCTCCAACCATAGAGAAAACAACACCCGGTCGAGAATCTGAATTTGACTTAAGGAAATCAAAAAAGACATCACCACCATACAGAGTAATGCTACACAATGACAACTATAACAAAAGAGAATATGTAGTGCAAGTGTTGATGAAAGTGATACCTGGAATGACAGTTGATATAGCAGTTAACGTCATGCAAGAAGCACATATTAATGGATTAGCAGTGGTCATTATTTGTGCTCAAGTTGATGCTGAAGACCATTGCATGCAATTGAGAGGAAATGGTCTTTTAAGTTCAATTGAGCCAGCTGATGGTGGTTGTTGA 483 0.3892 MKASLRSATPLALISPNQLLNASTPGDKYFGFKYSKDRSTVMTMVASGKGGGLLEKPPTIEKTTPGRESEFDLRKSKKTSPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNVMQEAHINGLAVVIICAQVDAEDHCMQLRGNGLLSSIEPADGGC* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2208 160 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTOR PROTEIN CLPS 1 160 - -
Mtr6g2208 160 Pfam ATP-dependent Clp protease adaptor protein ClpS 78 146 IPR003769 GO:0030163
Mtr6g2208 160 Gene3D - 77 155 IPR014719 -
Mtr6g2208 160 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 1 160 IPR022935 GO:0006508
Mtr6g2208 160 SUPERFAMILY ClpS-like 77 154 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2208 Mtr-Chr6 39449179 39452377 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2208 K06891 - gmx:100785379 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2208 6 39449179 39452377 Mtr6g2208 6 39449179 39452377 ECH