Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2199 ATGGAAGATGATGAATCACCACAACTCAAGAGTGTTGTTATAATTTCTCTTCCACCTTCAAATAACCCTTCTTTAGGTAAAACCATAACCGCTTTTACTTTCTTTAACCCTTTTTCTCAACGACAACTTCATCAACATCAACATCAACATCATCATCAACAACAACAACAACAACAACCTCAAAACAATGATCCACCAATCCAATCCTACCCATCAAATCCTCAGCTTCAGTTTTCATTCAGAAGACTCTTTCACATCACCCCATTAAAACTTTTCACATTCTTTGGCATTTTTCTCTTTGCCCTTTTTCTCTATGGTTCTCTTTTTTCAACTACAACAATACTTGAACTACGTGGTGTCAAGAACAATGATGGTGATGATGAACCAAGTAGCTTTCTGCTTCCACTTTTTAAGAAACATGGTGTTCTTGGTCAGAGAGATTTGAAGCTTAAATTGGGGAAGATTGTTGATGTTAAAAAAAGGAACGTTATTGCTTCTAACTCTAAGGTTGTAGCTGTTGACTCTTCATCTGCTGTTTTTCCAATCAGTGGCAATGTTTATCCAGATGGGTTGTATTACACGCATTTACGTGTCGGAAACCCTCCGAAACGGTATTTTGTTGATGTGGATACAGGGAGTGACTTAACTTGGATTCAGTGTGATGCTCCGTGCAGAAGTTGTGCAAAGGGAGCAAATGCCATATATAAGCCAACACTATCCAACATAGTGCCGTCCGTAGACTCTCTATGCTTGGAAGTTCAGAAATATGAGAAGAATGGATATGATGAAAACTTCCAACAGTGTGACTATGAAATTCAATATGCAGACCATAGTTCTTCTTTAGGAGTTCTTATTAAGGATGAGCTTCATCTTATGACTACTAATGGATCCAAAACCAAGTTAAATTTTGTTTTCGGGTGTGGATACGATCAAGAGGGCATGCTTTTGAACACATTGGCAAAAACAGATGGAATCATGGGACTGAGCAGAGCGAAAGTAGGCCTACCTTATCAGTTGGCAAGTAAGGGGCTTATTAAGAATGTTGTTGGTCATTGCTTAGGAAATGATGGAGTTGGCGGTGGATACATGTTCTTAGGTGATGATTTTGTGCCTTCTTGGGGTATGACTTGGGTACCTATGGCCCAAACTACAGATTTATACCAAACTGAGATTCTTGGAATAAACTACGGAAATCGTCTACTCAGTTTTGATGGAAACAGCAAAGTTGGAAAGGTGGTTTTTGATAGTGGCAGTTCTTATACGTATTTTCCGAAAGAGGCGTACTTGGATCTTGTTGCTTCTCTTAAAGAAGTTTCTGGATTGGGACTCATTCAAGATGATTCAGATACAACTTTGCCAATTTGTTGGCAGGCTAATTTCCCAATCAGATCTGTCAAAGATGTCAAGGATTACTTCAAGACATTAACACTTCGTTTTGGAAACAAATGGTGGATTTTGTCCACATTGTTTCGGATACCGCCGGAGGGTTACTTGATCATTAGTAACAAAGGCAATGTTTGCTTAGCTATCCTTGATGGTAGCAATGTACATGATGGATCCTCCATTATACTTGGAGACATTTCACTGCGAGGACATTTGGTTGTGTATGACAATGTAAACAAGAATATTGGTTGGGAGAGAACAAAATGTGGCATGCCAAGCAAAATATTGAAGAAGACTCACAATTTCTTAAGTGATAGTATGTTATGA 1710 0.3865 MEDDESPQLKSVVIISLPPSNNPSLGKTITAFTFFNPFSQRQLHQHQHQHHHQQQQQQQPQNNDPPIQSYPSNPQLQFSFRRLFHITPLKLFTFFGIFLFALFLYGSLFSTTTILELRGVKNNDGDDEPSSFLLPLFKKHGVLGQRDLKLKLGKIVDVKKRNVIASNSKVVAVDSSSAVFPISGNVYPDGLYYTHLRVGNPPKRYFVDVDTGSDLTWIQCDAPCRSCAKGANAIYKPTLSNIVPSVDSLCLEVQKYEKNGYDENFQQCDYEIQYADHSSSLGVLIKDELHLMTTNGSKTKLNFVFGCGYDQEGMLLNTLAKTDGIMGLSRAKVGLPYQLASKGLIKNVVGHCLGNDGVGGGYMFLGDDFVPSWGMTWVPMAQTTDLYQTEILGINYGNRLLSFDGNSKVGKVVFDSGSSYTYFPKEAYLDLVASLKEVSGLGLIQDDSDTTLPICWQANFPIRSVKDVKDYFKTLTLRFGNKWWILSTLFRIPPEGYLIISNKGNVCLAILDGSNVHDGSSIILGDISLRGHLVVYDNVNKNIGWERTKCGMPSKILKKTHNFLSDSML* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2199 569 SUPERFAMILY Acid proteases 184 550 IPR021109 -
Mtr6g2199 569 ProSiteProfiles Peptidase family A1 domain profile. 192 546 IPR033121 -
Mtr6g2199 569 Pfam Xylanase inhibitor N-terminal 192 367 IPR032861 -
Mtr6g2199 569 PANTHER ASPARTYL PROTEASES 16 554 IPR001461 GO:0004190|GO:0006508
Mtr6g2199 569 Gene3D Acid Proteases 372 552 IPR021109 -
Mtr6g2199 569 Gene3D Acid Proteases 166 367 IPR021109 -
Mtr6g2199 569 PRINTS Pepsin (A1) aspartic protease family signature 198 218 IPR001461 GO:0004190|GO:0006508
Mtr6g2199 569 PRINTS Pepsin (A1) aspartic protease family signature 412 423 IPR001461 GO:0004190|GO:0006508
Mtr6g2199 569 PRINTS Pepsin (A1) aspartic protease family signature 522 537 IPR001461 GO:0004190|GO:0006508
Mtr6g2199 569 MobiDBLite consensus disorder prediction 43 71 - -
Mtr6g2199 569 Pfam Xylanase inhibitor C-terminal 400 546 IPR032799 -
Mtr6g2199 569 MobiDBLite consensus disorder prediction 52 71 - -
Mtr6g2199 569 PANTHER ASPARTYL PROTEASE APCB1 16 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2199 Mtr-Chr6 39238995 39244501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2199 175 550 Miscellaneous Gene Families AT1G77480 46.982 9.41e-108 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2199 - - cam:101497154 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2199 6 39238995 39244501 Mtr6g2199 6 39238995 39244501 ECH