Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2193 ATGGCTTCTCTTATTCATAGCAATCTAGTTTCTCTCTTCTGTCACATTTTTCTCTTGTTGATAATTTCTTATCCACCCAACATACTTTCCCAGCAACCAACCTCCTCAAGCCCTACAATAGCTCCATGCACATCAAGCCTCCTTCCTCTCTTTCCCTGCATGCCGTTCGTGCAAGGCGCGGTTAGCACTCCGGCCACCGGCTGTTGTAGCAACCTTGAGCAACTCTATAGCCAAGAGCCACACTGTCTTTGCTTCTTGTTTAACAACACTACTTTTACCTCTTTCCCCATCAATAGGACACTTGCTCTACAGATCCCAACTTTTTGTAACCTTCATGTTGATAATTCAGTTTGTCCAGGTGTGAAAATGCATGTGCCTCCTTCATCTTCACCAGATTCTCAAGTTTCTTTTCAGACAAGGAACAACTCTACTGTTGCTGCTTCTCCACTATTTTCAGTGCCACCAAGACCAAGCATCATTGGATTTGGATTAGGAAGAAGTGAAGCTATTAACTTGAATGCAAAGAATGGAATAATTGTTATCATGGCTATAACAATATTCATGTTCATATGA 573 0.4188 MASLIHSNLVSLFCHIFLLLIISYPPNILSQQPTSSSPTIAPCTSSLLPLFPCMPFVQGAVSTPATGCCSNLEQLYSQEPHCLCFLFNNTTFTSFPINRTLALQIPTFCNLHVDNSVCPGVKMHVPPSSSPDSQVSFQTRNNSTVAASPLFSVPPRPSIIGFGLGRSEAINLNAKNGIIVIMAITIFMFI* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2193 190 Pfam Probable lipid transfer 31 118 IPR016140 -
Mtr6g2193 190 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 42 121 IPR036312 -
Mtr6g2193 190 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 17 178 IPR043325 -
Mtr6g2193 190 SMART aai_6 43 118 IPR016140 -
Mtr6g2193 190 CDD AAI_LTSS 50 111 - -
Mtr6g2193 190 Gene3D - 39 116 IPR036312 -
Mtr6g2193 190 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 17 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2193 Mtr-Chr6 39186982 39188322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2193 41 165 Acyl Lipid Metabolism Gene Families AT1G73890 49.275 1.52e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2193 - - mtr:MTR_6g084630 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2193 6 39186982 39188322 Mtr6g2193 6 39186982 39188322 ECH