Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2189 ATGCCACGTCGCAAACGGGAGAATCTCCCACTGGAAAGTTCAACCGGCAATTATCCATCAAAGCGTAGAAAACATTCTCATTTCGAATCTTCAAGCTCTAATCGACTAGCATCTTCTTCCTCATCTTCTAGGAAATGGGTTTTCTCTTCTGAAGATTATTCTGATTGCGCCGATACGATTGTAGTTGTTTCATACAATATACTTGGCGTTGAAAATGCATCAAATCATCTGGATTTGTATTCTAATATCCCTCGACGTTTCCTGGATTGGGGCAGACGTAAGAGGCTCATACTTGAAGAGATTGATAGCTACAATGCAAGCATACTCTGTTTCCAGGAGGTTGATCATTTTGATGATTTAGATGATCTTTTTCAGAACAATGGCTTTAAAAGTGTTTACAAGGGTCGCACGGGAGAAGCCAATGATGGATGTGCTATATTTTGGAAAGACAAATTATTCAGTCTTTTGCACCAAGAAGATATAGAGTTTCAGAAATTTGGTATGCGTCACAATGTTGCCCAACTTTGTGTTTTGGAGGTAAACAATAATAATCCAGAATCTGACACATGTAAACTAACAGCCGAGGAACAATCCACGAAAAACAAAAGATTTGTAATAGGAAATATACATGTGCTGTTCAACCCTAACCGTGGTGATATCAAACTTGGCCAGGTCAGGCTTTTAATTGATAAAGCTTACAAGTTATCACAAGAATGGGGTGACATCCCTGTTATTTTAGCTGGGGATTTAAACAGTGTTCCACAGAGTGCAATATATAAATTTCTGTCTTCATCTAAGTTAGACATCCAATCACATGATCGCAGAAATATGTCTGGACAGCTTGAAATCCGGCCCAATCACAGAGAATTCAGATCGAACATTTCAATGTCTGTTTCAAGGCAGTTGCTACACAAATGGAGTGCGGAAGAACTAATCCTTGCAACTGGCGCAAAAGGAGTCACTTGTCTTCAGCACCAACTCAAGCTCCGCAGTGCTTATAGTGGTGTCCCTGGAAAGCATAGAACAAGAGATGATATTGGGGAGCCCTTGGCAACATCGTACCACTCTAAGTTCATGGGAACAGTTGATTATATCTGGCATTCCGAGGAACTTACTCCAGTCAGAGTTCTTGAAACCTTACCCGTTGATGTTCTTAGAAGAACTAGAGGACTCCCTACCGAGAAATGGGGAAGTGATCACCTTGCTGTTGTATGTGAACTGGCCTTTGCAAAAAGTGATGAAAGTTCTGAATCTTCTGATCTTCCTAGTGATGAAAGTTCTGAATCTTCTGATATTCCTTAG 1302 0.4048 MPRRKRENLPLESSTGNYPSKRRKHSHFESSSSNRLASSSSSSRKWVFSSEDYSDCADTIVVVSYNILGVENASNHLDLYSNIPRRFLDWGRRKRLILEEIDSYNASILCFQEVDHFDDLDDLFQNNGFKSVYKGRTGEANDGCAIFWKDKLFSLLHQEDIEFQKFGMRHNVAQLCVLEVNNNNPESDTCKLTAEEQSTKNKRFVIGNIHVLFNPNRGDIKLGQVRLLIDKAYKLSQEWGDIPVILAGDLNSVPQSAIYKFLSSSKLDIQSHDRRNMSGQLEIRPNHREFRSNISMSVSRQLLHKWSAEELILATGAKGVTCLQHQLKLRSAYSGVPGKHRTRDDIGEPLATSYHSKFMGTVDYIWHSEELTPVRVLETLPVDVLRRTRGLPTEKWGSDHLAVVCELAFAKSDESSESSDLPSDESSESSDIP* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2189 433 MobiDBLite consensus disorder prediction 412 433 - -
Mtr6g2189 433 SUPERFAMILY DNase I-like 59 408 IPR036691 -
Mtr6g2189 433 Pfam Endonuclease/Exonuclease/phosphatase family 63 400 IPR005135 GO:0003824
Mtr6g2189 433 Gene3D Endonuclease/exonuclease/phosphatase 34 422 IPR036691 -
Mtr6g2189 433 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 26 409 - -
Mtr6g2189 433 MobiDBLite consensus disorder prediction 1 38 - -
Mtr6g2189 433 MobiDBLite consensus disorder prediction 410 433 - -
Mtr6g2189 433 PANTHER PROTEIN ANGEL 26 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2189 Mtr-Chr6 39096188 39101926 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2189 90 294 EF-hand Containing Proteins AT5G54130 25.926 1.46e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2189 - - gmx:100777474 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2189 6 39096188 39101926 Mtr6g2189 6 39096188 39101926 ECH