Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2180 ATGGCTTTCTCAAACAACAACCTTAAACTATCCTCAGAACTTCAATTCAACAATTCATCATCATCATCATTACCATTCTCACTCATCACTCTCTCTCGCTCTTCTTTCACTCTATCTCATAATCACTTTCTCTCTCATCCCAAAAAACCCTCATTTCCTTCTCTCACTACTTTCTCTTCCCTCAAAACAACCCACCAGTCTTCTCCCAACCCAACTCCACCATGGCTCACAAAAAATCCATCTTCTCCCAAAAGGGTCACTGAATCTCCTATCAAAGATGACCCTTTTCAACCACAGCCTCAAAAACCCAAAAATCCTGTTGAAAGAATCGTTTTTAGGTTAAGAAACCTAGGTTTAGTAGAAGAAGAAGATGAACAAGAAGAAAAAGTTAAAGAAGAAGTAGTTAAGTTGAGTGCATTGAAAGTTACTGGTGATGAGAAGTTAAGTGAATTGTTGAAGATAAAATGGGTTCGTCCTGATGTTTTATTGGATGAGGAAGATGAAGATGAGAAAATGGTGGTTCCATGGAAGAGAGAGGAAGAGAGAGAAATGAGGAGTATTGATAGTGGTGGTGGAATTAAAGAAGAGGGGTTTAAGAAGAGGACATTAAAGGCACCATCTTTAGCTGAATTGACACTTGAGGATGAATTGTTGAGGAGGTTGAGGAGAGAGGGTATGCATTTGAGAGAAAGGGTTAGTGTACCCAAAGCTGGATTGACACAAGAGGTTATGGAGAAGATTCATGAGAGCTGGAGGAAAAAGGAGTTGGTTAGGCTTAAGTTTCATGAAGAGCTTGCTAAGAATATGAGGATTGCTCATCAGATTGTTGAGCGCCGAACAGGAGGGTTGGTTACATGGAGAGCGGGAAGTGTTATGATCGTGTATCGTGGTAAAAATTACCAAGGTCCTGCTTCCCCGGAACTCGATGTAAAGGAAGGTGATGGTTTTTTCGTTCCGGATGTCTCATCGGGAAGTTTGTCGAAAACAAAAGACAGTAATGCAACCTCATCCCTCGAAAATAGTGAGCAAGTTGGGAGGAACGTCGAACTGCCTGAGAAAATGACAGAAGAGGAAGCAGAGTACAATGCGCTGCTTGATGATTTAGGTCCTCGATTTGTTGGATGGTGGGGTACAGGAATACCTCCTGTTGATGCTGATTTACTTCCCCGTGAAGTTCCTGGTTACAAAACACCTTATAGGCTTCTTCCTACGGGGATGCGCTCTCGACTAACAGGTGCAGAGATGACCGATTTGAGGAAAATTGCAAAGTCACTTCCTTGTCATTTTGCCTTAGGGAGAAATAGAAATCACCAAGGCCTAGCATGTGCTATTCTTAAGCTTTGGGAGAGGAGTTTAATCGCAAAGATTGCTGTTAAACCCGGTATCCAGAACACAAACAATAAACTAATGGCCGACGAGCTTAGTACATTAACAGGAGGTACCTTGCTGCTAAGGAATAGATTTTACATTGTTATATATCGTGGGAAGGACTTTGTTCCAACAGGTGTGGCTGCAGTTTTGGCTGAAAGACAGGAATTGACAAAACAAGTACAGGATGTTGAAGAGAAGGTGCGGTGCAAAGCTGTTGTTGCAACTCCATCTGTGCAAGGTGAAGCAACAGCACCGGCTGGATCTTTAGCTGAGTTCTATGAGGCCCAAGCTCGTTGGGGAAGGGACGTATCTTCTGAAGAACACGAGAGGATGATAAAAGAAGCTACCAAAGCCAAGAATGTTAAGCTTGTCAAACAAATTGAACACAAAATCTCTCTTGCTGCGAACAAATTGCATAGAGCAGAAAGGCTGTTAGCCAAAATAGAATCATCCATGGTTCCAGTTGGTCCTGATTATGACCAGGAAACAATCACAGATGAAGAACGAGTGGTGTTCCGCCAGATTGGTTTAAGAATGAAGGCATACTTACAACTTGGTATACGTGGTGTTTTCGATGGTGTCATTGAGAACATGCATTTGCATTGGAAACACCGAGAACTTGTTAAATTAGTAACAAAACAGAAGAATCGTGCTTTTGTCGAAGACACAGCTAGGTTACTGGAATATGAGAGTGGTGGAATACTCGTGGCAATAGAGAAAGTTTCAAAAGAATTTGCTATTATTTACTATCGTGGAAAAAATTACAAGCGGCCACTCACTCTAAGGCCTAGAAACCTTCTAACAAAGGCAAAGGCATTGAAGCGTTCTGTAGCCATGCTACGCCATGAGGCTCTGAGTAACCATATTACAGAATTGGAAACAACAATAGAACAAATGAAACAAGAACTCGGTCTTTCGGACGATGAATTAAGCATGAAGGAAGGGCATGAAAACCAACTAGATTACAACTCAGAATTCTCTCAGAGTGAGGATGACGAAGATTCTGATGGTTTTGATGACGAGGAAGACACACCGATTGGGATGACGAGGAGGACTGAGTTTTCGGAACTCGACGTCGATGAGCATCCTTGA 2463 0.4214 MAFSNNNLKLSSELQFNNSSSSSLPFSLITLSRSSFTLSHNHFLSHPKKPSFPSLTTFSSLKTTHQSSPNPTPPWLTKNPSSPKRVTESPIKDDPFQPQPQKPKNPVERIVFRLRNLGLVEEEDEQEEKVKEEVVKLSALKVTGDEKLSELLKIKWVRPDVLLDEEDEDEKMVVPWKREEEREMRSIDSGGGIKEEGFKKRTLKAPSLAELTLEDELLRRLRREGMHLRERVSVPKAGLTQEVMEKIHESWRKKELVRLKFHEELAKNMRIAHQIVERRTGGLVTWRAGSVMIVYRGKNYQGPASPELDVKEGDGFFVPDVSSGSLSKTKDSNATSSLENSEQVGRNVELPEKMTEEEAEYNALLDDLGPRFVGWWGTGIPPVDADLLPREVPGYKTPYRLLPTGMRSRLTGAEMTDLRKIAKSLPCHFALGRNRNHQGLACAILKLWERSLIAKIAVKPGIQNTNNKLMADELSTLTGGTLLLRNRFYIVIYRGKDFVPTGVAAVLAERQELTKQVQDVEEKVRCKAVVATPSVQGEATAPAGSLAEFYEAQARWGRDVSSEEHERMIKEATKAKNVKLVKQIEHKISLAANKLHRAERLLAKIESSMVPVGPDYDQETITDEERVVFRQIGLRMKAYLQLGIRGVFDGVIENMHLHWKHRELVKLVTKQKNRAFVEDTARLLEYESGGILVAIEKVSKEFAIIYYRGKNYKRPLTLRPRNLLTKAKALKRSVAMLRHEALSNHITELETTIEQMKQELGLSDDELSMKEGHENQLDYNSEFSQSEDDEDSDGFDDEEDTPIGMTRRTEFSELDVDEHP* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2180 820 ProSiteProfiles CRM domain profile. 619 719 IPR001890 GO:0003723
Mtr6g2180 820 SMART CRS1_YhbY_2 621 708 IPR001890 GO:0003723
Mtr6g2180 820 SMART CRS1_YhbY_2 213 296 IPR001890 GO:0003723
Mtr6g2180 820 SMART CRS1_YhbY_2 410 494 IPR001890 GO:0003723
Mtr6g2180 820 Coils Coil 739 766 - -
Mtr6g2180 820 MobiDBLite consensus disorder prediction 55 108 - -
Mtr6g2180 820 ProSiteProfiles CRM domain profile. 211 307 IPR001890 GO:0003723
Mtr6g2180 820 MobiDBLite consensus disorder prediction 783 799 - -
Mtr6g2180 820 MobiDBLite consensus disorder prediction 773 820 - -
Mtr6g2180 820 Coils Coil 581 601 - -
Mtr6g2180 820 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 7 815 IPR045278 GO:0000375|GO:0003729
Mtr6g2180 820 SUPERFAMILY YhbY-like 212 304 IPR035920 -
Mtr6g2180 820 Pfam CRS1 / YhbY (CRM) domain 214 296 IPR001890 GO:0003723
Mtr6g2180 820 Pfam CRS1 / YhbY (CRM) domain 622 708 IPR001890 GO:0003723
Mtr6g2180 820 Pfam CRS1 / YhbY (CRM) domain 410 494 IPR001890 GO:0003723
Mtr6g2180 820 Gene3D - 620 719 IPR035920 -
Mtr6g2180 820 Gene3D - 409 500 IPR035920 -
Mtr6g2180 820 Gene3D - 211 308 IPR035920 -
Mtr6g2180 820 Coils Coil 120 140 - -
Mtr6g2180 820 SUPERFAMILY YhbY-like 620 718 IPR035920 -
Mtr6g2180 820 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 7 815 - -
Mtr6g2180 820 MobiDBLite consensus disorder prediction 322 344 - -
Mtr6g2180 820 MobiDBLite consensus disorder prediction 55 72 - -
Mtr6g2180 820 MobiDBLite consensus disorder prediction 321 345 - -
Mtr6g2180 820 MobiDBLite consensus disorder prediction 800 820 - -
Mtr6g2180 820 ProSiteProfiles CRM domain profile. 408 505 IPR001890 GO:0003723
Mtr6g2180 820 Coils Coil 503 523 - -
Mtr6g2180 820 SUPERFAMILY YhbY-like 410 500 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2180 Mtr-Chr6 38997356 39004884 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2180 - - gmx:100788177 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2180 6 38997356 39004884 Mtr6g2180 6 38997356 39004884 ECH