Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2179 ATGAGTAGAAAGAAAAGGGTATTTTCAATTGATAGTATTGAAGAGGTTGCTGTGGATTTCTTCAACTATGTTTTGCAGGAGAAGCCAAAGATTCCATTTTTCATTCCAGTTATTTTGATTGCTTGTGCTGTTGAAAAATGGGTCTTTTCTTTTTCTACTTGGGTTCCTCTTGCACTTGCTGTTTGGGCTACTATACAGTATGGAAGATACCAACGCAAACTACTTGTAGAGGACTTGGATAAGAAATGGAAGCGAATCATATTGAATAACTCGCCCATCACACCATTGGAGCACTGTGAATGGCTGAATAAATTGTTGACAGAAATCTGGCCCAACTATTTTAATCCCAAGCTTTCTTCAAGGTTATCAGCTATAGTTGAGGCACGTTTGAAGCTCCGGAAACCAAGATTTCTTGAACGAGTTGAGCTACAAGAGTTTTCACTAGGATCATGCCCTCCTAGCTTGGCCTTACAAGGGATGCGATGGTCAACTATCGGCGATCAGCGAGTTATGCAACTTGGATTTGATTGGGACACCCATGAAATGAGCATTTTGCTCCTTGCTAAGCTTGCGAAACCATTGATGGGAACTGCACGAATCGTTATTAACAGTCTTCATATCAAGGGAGATCTTATCTTTACGCCAATTCTAGATGGAAAAGCACTTTTATATTCGTTTGTATCAGCTCCTGAGGTGAGAGTTGGAGTTGCCTTTGGAAGCGGTGGGAGTCAGTCACTTCCAGCTACTGAGTGGCCTGGTGTTTCTTCTTGGCTGGAAAAACTTTTTACTGACACTCTGGTTAAAACCATGGTGGAACCTCGGCGACGATGTTTCACTTTGCCTGCTGTTGATTTAAGAAAAAAGGCGGTTGGAGGGATCATATATGTTAGAGTGATTTCAGCCAATAAACTTTCTAGTAGTTCCTTCAAGGCATCTAGGAGGCAACAAAGTGGATCAACCAATGGTTCTTCGGAAGACGTTTCTGACGACAAGGACCTGCATACATTTGTAGAGGTAGAAATTGAGGAATTGACGAGGAGAACAGATGTCAGATTAGGTTCAACTCCTAGATGGGATGCTCCATTTAATATGGTTTTGCATGACAATACAGGAACACTTCGTTTCAATCTTTACGAGTGTATTCCCAACAATGTGAAGTGTGACTATCTAGGAAGTTGTGAAATCAAGCTGAGGCATGTTGAAGATGACTCAACAATAATGTGGGCAGTAGGACCAGATTCCGGGATTATAGCAAAGCAAGCACAATTTTGTGGAGATGAAATTGAAATGGTTGTCCCATTTGAGGGTACTAACTCTGGAGAGTTGAAGGTGAGCATTGTAGTGAAAGAGTGGCAATTTTCTGATGGAACTCATAGCTTGAACAATCTCCGGAACAACTCTCAGCAGTCACTTAACGGATCATCAAATATTCAGTTAAGAACGGGAAAGAAACTTAAAATAACTGTTGTAGAAGGAAAGGATCTTGCTGCTGCAAAAGAAAAAACTGGAAAATTTGATCCATACATTAAATTGCAATATGGAAAGGTTATGCAGAAAACAAAGACTTCTCATACTCCAAATCCTGTTTGGAATCAAACAATTGAATTTGATGAGGTTGGTGGCGGCGAATACTTAAAACTAAAAGTATTTACTGAGGAACTTTTCGGAGATGAAAACATTGGTAGTGCACAAGTAAATTTGGAAGGACTGGTTGATGGATCGGTCAGGGATGTATGGATTCCTCTTGAAAGAGTGCGTTCTGGAGAAATCAGACTTAAAATAGAAGCCATAAAAGTGGATGACCAAGAAGGATCAACGGGTTCAGGCTCAGGAAATGGTTGGATAGAACTTGTTCTGATTGAAGGGAGGGATCTTGTTGCCGCAGATCTCAGAGGCACAAGTGATCCATATGTTAGGGTACACTATGGAAACTTCAAGAAAAGGACAAAGGTTATATACAAAACTCTAACCCCTCAATGGAACCAGACCCTAGAGTTCCCTGATGATGGAAGTCCCTTGATGCTTTATGTGAAGGACCATAATGCGTTACTACCTACATCAAGTATAGGTGAATGTGTTGTAGAATATCAAAGGCTGCCCCCGAACCAGATGGCTGATAAGTGGATACCACTTCAAGGTGTGAAAAGGGGTGAAATTCATATTCAAATTACTAGAAAAGTTCCAGAAATGCAGAAGAGGCAAAGTATGGACTCTGAACCTTCTTTGAGTAAATTGCACCAAATTCCTACGCAGATAAAACAGATGATGATCAAGTTTAGGTCTCAAATCGAAGATGGAAATCTTGAAGGACTCTCTACAACATTGAGTGAGCTAGAAACTTTAGAGGATACACAAGAAGGATATGTAGCTCAGCTAGAGACGGAACAAATGCTTCTTCTCAGCAAGATAAAGGAACTTGGCCAAGAGATCATTAATTCTTCTCCTTCTCCTTCCTTAAGCAGAAGAATTTCTGAAAGTGTCAACTAA 2487 0.4053 MSRKKRVFSIDSIEEVAVDFFNYVLQEKPKIPFFIPVILIACAVEKWVFSFSTWVPLALAVWATIQYGRYQRKLLVEDLDKKWKRIILNNSPITPLEHCEWLNKLLTEIWPNYFNPKLSSRLSAIVEARLKLRKPRFLERVELQEFSLGSCPPSLALQGMRWSTIGDQRVMQLGFDWDTHEMSILLLAKLAKPLMGTARIVINSLHIKGDLIFTPILDGKALLYSFVSAPEVRVGVAFGSGGSQSLPATEWPGVSSWLEKLFTDTLVKTMVEPRRRCFTLPAVDLRKKAVGGIIYVRVISANKLSSSSFKASRRQQSGSTNGSSEDVSDDKDLHTFVEVEIEELTRRTDVRLGSTPRWDAPFNMVLHDNTGTLRFNLYECIPNNVKCDYLGSCEIKLRHVEDDSTIMWAVGPDSGIIAKQAQFCGDEIEMVVPFEGTNSGELKVSIVVKEWQFSDGTHSLNNLRNNSQQSLNGSSNIQLRTGKKLKITVVEGKDLAAAKEKTGKFDPYIKLQYGKVMQKTKTSHTPNPVWNQTIEFDEVGGGEYLKLKVFTEELFGDENIGSAQVNLEGLVDGSVRDVWIPLERVRSGEIRLKIEAIKVDDQEGSTGSGSGNGWIELVLIEGRDLVAADLRGTSDPYVRVHYGNFKKRTKVIYKTLTPQWNQTLEFPDDGSPLMLYVKDHNALLPTSSIGECVVEYQRLPPNQMADKWIPLQGVKRGEIHIQITRKVPEMQKRQSMDSEPSLSKLHQIPTQIKQMMIKFRSQIEDGNLEGLSTTLSELETLEDTQEGYVAQLETEQMLLLSKIKELGQEIINSSPSPSLSRRISESVN* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2179 828 Coils Coil 789 809 - -
Mtr6g2179 828 MobiDBLite consensus disorder prediction 310 324 - -
Mtr6g2179 828 Gene3D C2 domain 604 726 IPR035892 -
Mtr6g2179 828 Gene3D C2 domain 465 600 IPR035892 -
Mtr6g2179 828 PANTHER PLANT SYNAPTOTAGMIN 1 820 - -
Mtr6g2179 828 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 95 281 IPR031468 GO:0008289
Mtr6g2179 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 607 724 IPR035892 -
Mtr6g2179 828 ProSiteProfiles C2 domain profile. 463 580 IPR000008 -
Mtr6g2179 828 Pfam C2 domain 615 711 IPR000008 -
Mtr6g2179 828 Pfam C2 domain 293 403 IPR000008 -
Mtr6g2179 828 Pfam C2 domain 484 582 IPR000008 -
Mtr6g2179 828 PANTHER OS01G0128800 PROTEIN 1 820 - -
Mtr6g2179 828 MobiDBLite consensus disorder prediction 310 330 - -
Mtr6g2179 828 ProSiteProfiles C2 domain profile. 586 709 IPR000008 -
Mtr6g2179 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 292 406 IPR035892 -
Mtr6g2179 828 SMART C2_3c 614 708 IPR000008 -
Mtr6g2179 828 SMART C2_3c 484 579 IPR000008 -
Mtr6g2179 828 SMART C2_3c 293 409 IPR000008 -
Mtr6g2179 828 Gene3D C2 domain 289 455 IPR035892 -
Mtr6g2179 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 484 597 IPR035892 -
Mtr6g2179 828 CDD C2 615 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2179 Mtr-Chr6 38988871 38996406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2179 333 757 Lipid Metabolism Gene Families AT3G61300 23.975 9.62e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2179 - - gmx:100807475 1415.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2179 6 38988871 38996406 Mtr6g2179 6 38988871 38996406 ECH