Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2092 ATGATGATGTTGGATTCACAACAGCATCAATGTTTCTATTCCATGTTTTTCTTCTTCTTAGTTGTTCTTGTTAGTTCAGTTAATGGAGTTACAGTGCCTGAAACAGTGCATTTGGATACTGGAGGGTTGAGTAGAGATGTTTTTCCTAAGGGGTTTGTGTTTGGAGTTGCAACTTCTGCTTATCAAGTAGAGGGTATGGCTAGCAAAGAGGGTCGTGGCCCTAGTATTTGGGATGTTTTCATCAAAAAACCCGGGATTGTCGCAAATAATGGCACAGGAGAAGTTTCTGTTGATCAATATCATCGCTACAAAGAAGATATAGATCTCATCGCAAAGCTAAATTTTGATCAATACCGGTTCTCAATCTCATGGTCCAGAATTTTTCCAAATGGAACTGGCAAAGTAAATTGGAAAGGTGTAGCGTACTACAACAGATTGATCGATTACTTGCTAGAAAAGGGCATTACTCCTTACGCAAATCTCTACCATTATGACCTTCCTTTAGCTCTTGAGTTGAAATACAACGGTTTATTGAGCCGTAATGTTGTAAAAGATTTTGCGGATTATGCAGATTTTTGTTTTAAGACATTTGGAGACAGAGTTAAGAATTGGATGACCTTCAATGAACCAAGAGTTGTTGCTGCACTTGGTTATGATAATGGCTTTTTTGCCCCTGGAAGATGTTCAAAAGAATATGGAAATTGTACAGCTGGAAATTCAGGAACTGAGCCTTATACTGTAGCTCACAATTTGATATTGTCACATGCTGCTGCTGCTCAAAGATATAGAGAGAAATACCAGGAAAAGCAAAAGGGTAGGATTGGAATTTTGTTGGATTTTGTTTGGTATGAGCCTCTTACAAGATCAAAGGCTGATAACTATGCTGCTCAAAGAGCTAGAGACTTTCATATTGGATGGTTCATTCATCCCCTTGTTTATGGTGAGTATCCAAGAACTATGCAAAATATTGTTGGGAATAGACTCCCAAAGTTTACTAAGGAGGAAGTGAAACTTGTGAAGGGCTCAATTGATTTTGTTGGTATCAATCAATATACTACTTACTACATGTATGATCCTCATAACCAAAAACCAAAAGTCCCTGGCTATCAATCGGATTGGAATGCAGGGTTTGCTTATGCTAAGAATGGAGTGCCTGTTGGACCAAGAGCATATTCATACTGGCTTTACAATGTACCATGGGGTCTGTACAAATCAATAATGTACATCAAGGAGCATTATAAAAACCCAACTATGTTCTTATCTGAAAATGGCATGGATGATCCTGGTAATGTAACATTTTCCAAGGGTTTGCATGACACAACAAGAATAAACTATTACAAAGGGTATTTGACTCAACTAAAGAAAGCTATAGATGATGGAGCAAATGTGTTTGGATACCATGCTTGGTCATTGCTTGATAACTTTGAATGGAGATTAGGGTACACATCAAGGTTTGGTATTGTCTATGTTGACTTCAAAACTCTCAAGAGAACCCCTAAGATGTCTGCATATTGGTTCAAGCAGCTACTTACCAAAAAGAAGTAA 1545 0.3793 MMMLDSQQHQCFYSMFFFFLVVLVSSVNGVTVPETVHLDTGGLSRDVFPKGFVFGVATSAYQVEGMASKEGRGPSIWDVFIKKPGIVANNGTGEVSVDQYHRYKEDIDLIAKLNFDQYRFSISWSRIFPNGTGKVNWKGVAYYNRLIDYLLEKGITPYANLYHYDLPLALELKYNGLLSRNVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKEYGNCTAGNSGTEPYTVAHNLILSHAAAAQRYREKYQEKQKGRIGILLDFVWYEPLTRSKADNYAAQRARDFHIGWFIHPLVYGEYPRTMQNIVGNRLPKFTKEEVKLVKGSIDFVGINQYTTYYMYDPHNQKPKVPGYQSDWNAGFAYAKNGVPVGPRAYSYWLYNVPWGLYKSIMYIKEHYKNPTMFLSENGMDDPGNVTFSKGLHDTTRINYYKGYLTQLKKAIDDGANVFGYHAWSLLDNFEWRLGYTSRFGIVYVDFKTLKRTPKMSAYWFKQLLTKKK* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2092 514 PRINTS Glycosyl hydrolase family 1 signature 342 356 IPR001360 GO:0004553|GO:0005975
Mtr6g2092 514 PRINTS Glycosyl hydrolase family 1 signature 418 426 IPR001360 GO:0004553|GO:0005975
Mtr6g2092 514 PRINTS Glycosyl hydrolase family 1 signature 439 450 IPR001360 GO:0004553|GO:0005975
Mtr6g2092 514 PRINTS Glycosyl hydrolase family 1 signature 460 477 IPR001360 GO:0004553|GO:0005975
Mtr6g2092 514 PRINTS Glycosyl hydrolase family 1 signature 484 496 IPR001360 GO:0004553|GO:0005975
Mtr6g2092 514 Pfam Glycosyl hydrolase family 1 45 513 IPR001360 GO:0004553|GO:0005975
Mtr6g2092 514 SUPERFAMILY (Trans)glycosidases 38 511 IPR017853 -
Mtr6g2092 514 PANTHER GLYCOSYL HYDROLASE 27 511 IPR001360 GO:0004553|GO:0005975
Mtr6g2092 514 Gene3D Glycosidases 30 514 - -
Mtr6g2092 514 PANTHER BETA-GLUCOSIDASE 44 27 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2092 Mtr-Chr6 37496522 37501419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2092 34 512 Glycoside Hydrolase AT3G18080 79.792 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2092 K05350 - gmx:100814740 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2092 6 37496522 37501419 Mtr6g2092 6 37496522 37501419 ECH