Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2016 ATGGCAAGGAAGATGCGTTGTGCCCCTCAGTCAAAAGGTAAAGATAGTCCAAAAGTTTCAGAAGCAGGAAAGAATTCCAAATCAACGACAAATCAGGAACACAACAAAGTTACAACTTTGGACCTCGCAAAACACTCTGAACAAGGATCTTCTGTTTCAACGATCAACTCTGATAGTAGGCTTGCCATCCTTACCTTCCTTAGTTTTGAGCCTGATGGAACCTGGAGAATTCTTGCCGTTCCAGTGCAGTGTCTCAATCACGTTAACCTAGCTTCTGGCAGCATAAGTATGGATGGTCTGCAACTTCTTTTCCCTCCAACAACTGTTAATAGACCGAAGATTGATCAATGTAAGGGACCTAGAGGACAGGTCCCTCCGAGTGCTTATTCAGCTAAATCATATGAAAGAAGAAGTTTTACTGGTTCAAATGTTCGTCGTAGATGTCAAAACAAAGTAGCTAACAAAGCTTGTAAGCTGAATGAACTTCCTGTGAATTCTTGTGCAGGAAGTTCGGTAGTTAATAGTAGCCCTAGCTTGTCCCCTCAAAGTTCTGTCGCCGGTATTTCGTCTGATAATTGCATGAGTAACACCAAGGAGGATAAGTCTCTGCAGAAAAACTCGAGAAGAAGGGCAAGAAAGAAAGCTAAACAAATGAAGAAGCAGTCAAGTGAAAGCGGATCTAGTGAAAGAGAACTTCGTACCGAGGAATATGGCTGTGTAAGTTTGGCTTCTGAAACCTGCAGCAGCAATGATGTGGATGCGACTGCACCGGATTTTTCATCTTCCGACGATAGGTTAATGAAAATTGATTGTGAAAGGAATGAGATGAATGACAAAAGCAATGTTGTGGATGCACTGAAATGCCGCGACTCTTGTATCGATGAGGCAGTGATGTCAAAAGATGAATCAATGAATCAGCTTCATGATAGAGAAACAAAGGATATTCAACACGTTGAGCTATGCAGTTTTAATGATATACAAGACTCTTTGGTGTTGGATTCAGTTTCCATTGGATCGAAAAGTGATGAAAGTGTCAATGATGGTCATATAGGAAAATCGTTCAACAAAGCAAGTTCTGGAGTCACTTCAAATTCAGGAGATGAGTATTTTCTTTGTCAAGGCTTAACATCAGGTTCTCGCAATAACTATGAACATAACGAGGAAACGCGGAACAGTGGTCAAAATTGCATTGTCAATGATAAGAGAGTTCAGCAAAAGATAAATATGTCGAAGAGTTCTAGTTTCAACAAATTTTCGGGTGTTGGTCGAACAGGGAAGGAAAACAGTCATTCTGTCTGGCAAAAGGTTCAGAAGAACAATTCGAGTGAATGTGGTGGTGGTGATCTGAAGAAAGTAAACACAACTTTGTCACAATCCGTTTCCGCTACCGAAAAGGATGATCCTTCAGCCATAAAAAATTGTAATAATTCTGTTGGTGCCAATGCTGTTTCAGGACCAGAGGATAAAAAAAATGTGAAAAATAAAGTCAGTCGAAAATCAAAAGGTAAAACGGATTCAGTTCCAAGAAAAGGAGCCTGCAACTATTCTAGGAAGGGTTCCAATTTTAACAGGACTGTGTTAAATGATAACTTGAAGGTTAGTATTCAACAGAATGATTCTTCAACTATCTCATCTCAGGAAAATAATCAACAAGGATTGGTAATGGAGATTCAGACCAATGGAGCTGAACAGGAAACATCTGAGATAGCTCACAGCGAAAAATTTCATGCGGATGAGTCCGATATCCTGAAAAGTTCACAAGAAACAGAGAATGGAAGTATAGACATTCAATCTCAAGTTTCTTGTTCTGATGAGCAATCTCAAGTTTCTTGTAAACTTTTAGACAATCAAGTTGGTCAAACAGTGAAAGAAGTTTCTTCTGCAGATTACAATGGACAAAACCACAGTTCTGGCTCTACAGCCCTATGGAAATGGATACCAGTTGGGAAAAAAGATGCTGGAATGGCAAAATCTGAGTCTAATAGTTCATCATCACAATATTCTGATGAACCAACTAGTAAAATTATTGACATGGAAAACGGACTGGAACCAAAATCAGATTCTCTTTCTCAAAATCAGGATTCTTCACCAGATACAAGAACTACATCCATTGGTCGAATCGAGGGTGAAAATCATAAACTAGGTGAGGAGATTGCAGGTTCATTGACCGAGCGTATGGACAAACATCAAGTAGATAATCACATAATTTATGAATGTGAGAGTCAATGTTTGTTAGAAAATGATTCCTACAGAATAGCTCAAGCGGTGAATGACGCCTGCCGAGTTCAATTAGCTTGTGATGTAGTACACAAGGTGACTGGTGCCCCTGTTGCAGAATTTGAAAAACTACTTCATTTTTGTAGTCCTGTTATTTGTCGATCACCCGATTCACTTGGTTGTTTCACCTGTGCAAAAAACCATTTGATTGGTGTCCCACTGTGCAGACATGAGATACCTGAAGTATCTTTGGGATGCTTGTGGGAGTGGTATGAGAAACATGGGAGCTATGGATTAGAGATAAGGGCTTGGGATTATGAAGATCCGAAGACATTAGGTGGTGTTGGTCATTTTCCGTTCCGTGCCTATTTTGTCCCTTCTTTATCAGCAGTTCAGCTGTTTAAGAACCGTGAAAGTCGATGTGTGAACAACAGTGTCAGCTTTCTGAATTGTAAGGTTTCAGAGGCTTGTGAAATGATCGACAATTCAGAAGACTCGTTTATAGGTCGTTTTAGTAATGCCTCTAATCCATCTACTGACTCAACCTGTTCTGGTGATTCAGAACTTCTTTTCGAATATTTTGAATGCGAACAACCTCAACAAAGGCGACCTCTATATGAAAGGATACAAGAGCTAGTTAGAGGCGATGTACAAATCCAGTCGAAAACTTATGGGGACGCAACTAAACTGGAATCTATAAACCTGCGGGATCTTCATCCTAGATCTTGGTACTCGGTTGCATGGTATCCTATTTACCGTATACCAGATGGCAACTTTCGCGCATCTTTTCTGACTTACCATTCACTTGGGCATTTGGTTTGTAGAAGTTCAAATTCTGATTCGCCAACTCTGGATTCTTGTGTAGTTTCTCCAGCTGTAGGCCTTCAAAGCTACAATGCACAGGGTGAATGCTGGTTTCAGCTGAATCAATCTACACGGAGAACAGAAATGCTAGGCATAAATCCCTCAGTTTTTCTTCAAGAGCGTTTGAGGACACTTGAAGAAACAGCATCTCTTATGGCAAGAGCTGATGTCAACAAGGGGAACCAAACCTGCACAAACAGACATCCAGATTATGAGTTTTTCCTGTCGAGGCGACGGTATTGA 3324 0.404 MARKMRCAPQSKGKDSPKVSEAGKNSKSTTNQEHNKVTTLDLAKHSEQGSSVSTINSDSRLAILTFLSFEPDGTWRILAVPVQCLNHVNLASGSISMDGLQLLFPPTTVNRPKIDQCKGPRGQVPPSAYSAKSYERRSFTGSNVRRRCQNKVANKACKLNELPVNSCAGSSVVNSSPSLSPQSSVAGISSDNCMSNTKEDKSLQKNSRRRARKKAKQMKKQSSESGSSERELRTEEYGCVSLASETCSSNDVDATAPDFSSSDDRLMKIDCERNEMNDKSNVVDALKCRDSCIDEAVMSKDESMNQLHDRETKDIQHVELCSFNDIQDSLVLDSVSIGSKSDESVNDGHIGKSFNKASSGVTSNSGDEYFLCQGLTSGSRNNYEHNEETRNSGQNCIVNDKRVQQKINMSKSSSFNKFSGVGRTGKENSHSVWQKVQKNNSSECGGGDLKKVNTTLSQSVSATEKDDPSAIKNCNNSVGANAVSGPEDKKNVKNKVSRKSKGKTDSVPRKGACNYSRKGSNFNRTVLNDNLKVSIQQNDSSTISSQENNQQGLVMEIQTNGAEQETSEIAHSEKFHADESDILKSSQETENGSIDIQSQVSCSDEQSQVSCKLLDNQVGQTVKEVSSADYNGQNHSSGSTALWKWIPVGKKDAGMAKSESNSSSSQYSDEPTSKIIDMENGLEPKSDSLSQNQDSSPDTRTTSIGRIEGENHKLGEEIAGSLTERMDKHQVDNHIIYECESQCLLENDSYRIAQAVNDACRVQLACDVVHKVTGAPVAEFEKLLHFCSPVICRSPDSLGCFTCAKNHLIGVPLCRHEIPEVSLGCLWEWYEKHGSYGLEIRAWDYEDPKTLGGVGHFPFRAYFVPSLSAVQLFKNRESRCVNNSVSFLNCKVSEACEMIDNSEDSFIGRFSNASNPSTDSTCSGDSELLFEYFECEQPQQRRPLYERIQELVRGDVQIQSKTYGDATKLESINLRDLHPRSWYSVAWYPIYRIPDGNFRASFLTYHSLGHLVCRSSNSDSPTLDSCVVSPAVGLQSYNAQGECWFQLNQSTRRTEMLGINPSVFLQERLRTLEETASLMARADVNKGNQTCTNRHPDYEFFLSRRRY* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2016 1107 MobiDBLite consensus disorder prediction 457 519 - -
Mtr6g2016 1107 MobiDBLite consensus disorder prediction 22 37 - -
Mtr6g2016 1107 MobiDBLite consensus disorder prediction 457 482 - -
Mtr6g2016 1107 MobiDBLite consensus disorder prediction 680 714 - -
Mtr6g2016 1107 MobiDBLite consensus disorder prediction 218 232 - -
Mtr6g2016 1107 MobiDBLite consensus disorder prediction 1 37 - -
Mtr6g2016 1107 PANTHER DUF789 FAMILY PROTEIN 1 1106 - -
Mtr6g2016 1107 MobiDBLite consensus disorder prediction 170 200 - -
Mtr6g2016 1107 MobiDBLite consensus disorder prediction 170 232 - -
Mtr6g2016 1107 MobiDBLite consensus disorder prediction 488 506 - -
Mtr6g2016 1107 MobiDBLite consensus disorder prediction 684 704 - -
Mtr6g2016 1107 MobiDBLite consensus disorder prediction 413 432 - -
Mtr6g2016 1107 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 1 1106 - -
Mtr6g2016 1107 Pfam Protein of unknown function (DUF789) 778 1101 IPR008507 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2016 - - mtr:MTR_6g077930 2142.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2016 6 36620685 36628667 Mtr6g2016 6 36620685 36628667 ECH