Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2012 ATGGCACTGGCTAATGCTGCAGTGATCGGTCCTTCTCTGTATAGCGTTGCTCGCATCACGAAAGCTCCTTTTCCAGGTTCACATGGAGAAATTGGTTCTAGATTTTGTGGTTCTGCGTTTTGTGTTTGTTCTCACGCTGGGAAAAGTGATGTTGTTCTTGAACGGAGGAAGTTGAAATTTGGTGATAGTAATAATAATCGCATTGTTGAAAATCAAGTGTTGAAATCGACAGTCGAAATTCCGGTTTCGTGTTATCAGCTTATTGGCGTTCCTGATCGAGCTGAGAAAGATGAAATTGTTAAGGCAGTTATGAGTTTAAAAAATGCAGAAATTGACGAAGGTTACACAATGGGCGTTGTTGCATCTCGCGAGGATCTTCTGATGGATGTTAGGGATAAGCTCCTTTTTGAGCCAGAGTATGCTGGTAACCTGAAGGAAAAGATTCCCCCTAAACCTTCCCTTCGTATTCCTTGGTCTTGGTTGCCCGGTGCTCTATGCCTTCTTCAAGAGATTGGAGAATCAAAGCTTGTGCTGGACATTGGAAGAACGAGTCTTCAGCATCAAGATGCGAAGCCATATGCAGATGATTTAGTTCTTTCTATGGCACTAGCTGAGTGTACAGTTGCGAAAATTGGCTTTGAGAAGAACAAAGTATCTCAAGGTTTCGAAGCTCTTGCTCGTGCCCAGTGTCTTCTAAGAAGTAAACCATCTCTTGCAAAAATGACACTCTTATCTCAGATTGAAGAATCTCTTGAAGAGCTGGCCCCCGCCTGCACCTTGGAGCTATTGAGTGTGCCAAATACCCCTGAAAATGTTGAACGAAGACGAGGAGCAATTGCAGCTTTACGCGAATTGCTTAGACAGGGTCTTGATGTTGAAGCTTCATGCCAAGTACAGGACTGGCCTTCTTTTCTAAGCCAAGCATTTCACAATTTACTGGCTAATGAGATAGTTGATCTTCTTCCTTGGGATAGCTTAGCTGTGATGCGAAAGAATAAGAAGACAATTGAATCACAGAATCTAAGGATAGTAATTGATTCAAATTGTTTCTATAGAGTTTTTACAGCTCATATGGCACTTGGATTTTCCAGCAAGCAAAAAGAGTTGATTAACAAAGCAAAAAGCATATGCGAATGTTTGATAGCTTCAGAGGGCATTGATCTAAAATTTGAAGAAGCTTTTTGCCTATTCCTTCTTGGACTGGGCACAGAGGAAGAGGCAGTTGAAAAGCTCAAGCAGCTTGAGCTGAACTCAAATCCAAAACGTAATTCAGTCTTGGGGAAGGCAATAATGGATTCTTCAGCTGTAAACCCATCATTGGAACTGTGGCTGAAGGATTCTGCGCTTGATTTATATCCAGATACTAAAGGTTGTTCTCCAGCTTTGGCCAATTTCTTTAATGCTCAAAAGAAATTTTCTGGAAGCAAGAATTCTAAAGGATCTCCACAAATGTTTCCTACTATATGTCATAGGCCTCTATCCTCATCTGGTTCTGTAGAACGAAAAGATTTTGAGGAACCTCGCTCATATATGAGTTCTTCCTCAAATTTGGGGTTTGCTGTCAAGCAGCTGACTCCTACTGATTTGCAGGGTTCACTGCTATCTGGCAAAAATGAAAACGGAGTCAATCAAAGTGAGCAAACTGTTAAAGTGAAAAGGAACCTTAGCACTCATCACAATGGAATTTGGAATAATCACTTCACTCGTGCTCAAGTATTTGAAAGAATAACACACATTACCATATTGGGTTGTATTGCATTTGCTTGTATGAAGTTGTTGGGAATGAACCTGGGCAAGAATGGTTCTAACTTGGCTTTCAAAAAAGCCCACACTTCTACTTCTTGGACTACAAATTCATCTGCTAACTACACTGTAGGCCCTACCTATATTAGGCGAAGTTCTGTTGGCAACAAACTGAAGGGACTTATTTCAATGGTTAAGATGCAGTTTTTGCGCCGGCCAGATGCTGAAAGCCGAAGTGGTTTACACAGCACTCTTACCTCATCATCCTCCCCTATTAATGTGTATAGGAGGCTGATGCCTGTGGAAGAAGCGGAAACCCTTATTAGGGAATGGCAAACAATCAAAGCTGAAGCTTTGGGGCCTAGCCATGAAGTAAATGGCCTAACTGATGTCCTTGACGAATCTATGCTTGCTCAGTGGCAAGCTTTGGCAGATGCTGCAATAGAAAAATCTTGTCACTGGAGATTTCTTTTGCTAAAACTGTCTGTCCTTAGAGCCGACATACTATCAGATGGAAATGGATCAGACATAGCAGAGATAGAAGCCCTTTTAGAGGAAGCAGCTGAACTTGTTGACAGTTCTCAGCAAAAGAACCCAAACTACTATAGCACTTACAAAGTTAAGTATGTTGTGAAGAGGCAAGATGATGGATCATGGAAGTTCTGTGAAGCTGATATTCAAACGCGATGA 2433 0.4159 MALANAAVIGPSLYSVARITKAPFPGSHGEIGSRFCGSAFCVCSHAGKSDVVLERRKLKFGDSNNNRIVENQVLKSTVEIPVSCYQLIGVPDRAEKDEIVKAVMSLKNAEIDEGYTMGVVASREDLLMDVRDKLLFEPEYAGNLKEKIPPKPSLRIPWSWLPGALCLLQEIGESKLVLDIGRTSLQHQDAKPYADDLVLSMALAECTVAKIGFEKNKVSQGFEALARAQCLLRSKPSLAKMTLLSQIEESLEELAPACTLELLSVPNTPENVERRRGAIAALRELLRQGLDVEASCQVQDWPSFLSQAFHNLLANEIVDLLPWDSLAVMRKNKKTIESQNLRIVIDSNCFYRVFTAHMALGFSSKQKELINKAKSICECLIASEGIDLKFEEAFCLFLLGLGTEEEAVEKLKQLELNSNPKRNSVLGKAIMDSSAVNPSLELWLKDSALDLYPDTKGCSPALANFFNAQKKFSGSKNSKGSPQMFPTICHRPLSSSGSVERKDFEEPRSYMSSSSNLGFAVKQLTPTDLQGSLLSGKNENGVNQSEQTVKVKRNLSTHHNGIWNNHFTRAQVFERITHITILGCIAFACMKLLGMNLGKNGSNLAFKKAHTSTSWTTNSSANYTVGPTYIRRSSVGNKLKGLISMVKMQFLRRPDAESRSGLHSTLTSSSSPINVYRRLMPVEEAETLIREWQTIKAEALGPSHEVNGLTDVLDESMLAQWQALADAAIEKSCHWRFLLLKLSVLRADILSDGNGSDIAEIEALLEEAAELVDSSQQKNPNYYSTYKVKYVVKRQDDGSWKFCEADIQTR* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2012 810 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 34 808 IPR044685 -
Mtr6g2012 810 Pfam ARC6-like, IMS domain 685 802 IPR025344 -
Mtr6g2012 810 Coils Coil 758 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2012 Mtr-Chr6 36573269 36580440 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2012 - - lja:Lj2g3v0609710.1 1278.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2012 6 36573269 36580440 Mtr6g2012 6 36573269 36580440 ECH