Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2009 ATGGCAGTCACAGCCTCACCACCATCAGTAACCCAAGATCTCCTCAATTCCCTTCCCAAAACCCTAAAACTCAAAACCAAACAACAAGAGCTTCTTCTCCGAATCACAACCCTAGGTTTAATCTATATCCTCGCATTCATCACTCGTCTCTTCAGCGTCCTTCGCTATGAATCCATGATCCATGAATTCGATCCATATTTCAACTACCGCACCACTCTCTACCTCACAGAACACGGTTTCTCCGAGTTTTGGAATTGGTTCGATTCCGATTCATGGTATCCACTCGGACGAATCGTTGGCGGTACACTTTACCCCGGTTTAATGCTCACTGCTGCTGGATTATACAAAATTCTCCATTTTCTCAGATTTGCAGTTCATATTCGTGAAGTTTGTGTTCTTACAGCACCATTTTTCGCGTCGAATACTACCATTGTAGCGTATTTTTTCGGTAAAGAAATATGGGATTCTGGCGCGGGGATTGTCGCCGCTGCATTGATCGCGATTTGTCCGGGTTATATATCAAGATCTGTTGCTGGATCTTATGATAATGAAGGAGTGGCGATATTTGCGTTGTTGTTGACGTTTTATTTGTTTGTGAAAGCGGTGAATACCGGGAGTTTGTCGTGGGCATTGGCGTCGGCGTTTGGTTATTTTTATATGGTTTCGGCGTGGGGTGGTTATGTTTTTATTATAAATTTAGTGCCGCTTTATGTATTGGTGTTGTTGGTTACTGGGAGATATTCGTTGAGGCTCTATGTTGCTTATAATTGTATGTATGTTTTGGGAATGTTGCTTGCTATGCAGATTAGGTTTGTTGGGTTTCAACATGTTCAATCTGGTGAACATATGGCTTCTATGGGTGTCTTTTTCTTGCTTCAGGTATTTTTCTTTTTGGATTGGGTAAAGCATTTACTCGGAGATGTGAAACTGTTTCAAGCATTTTTGAGGATCACTGTAACTAGTGCAGTTGGTGTTGGTGCCGTTGCCTTGGGAGTAGGCATGGCATCTGGTTACATATCACCATGGACTGGAAGGTTTTATTCTTTGCTTGATCCAACATATGCTAAGGATCATATTCCAATTATTGCTTCTGTCTCTGAGCATCAGCCTACTGCTTGGTCGTCCTTCATGTTTGATTTCCATATATTGCTGTTCCTTTTCCCTGCTGGCCTCTATTTTTGCTTCAAGCGCTTGACAGATGCCACAATCTTCATAGTTATGTATGGTCTTACAAGCATGTATTTTGCTGGTGTTATGGTTCGATTAATCCTCGTTGCTACTCCTGCTGTATGCCTCATTAGTGCTATTGCGGTATCTGCTACCGTGAAGAATTTGACTCGGGTTGTTAGGGCGAAAGTCCAACCCGTACAGGGTGGTTCTGGTAAAGGAACTGGTGCTTCAAAAGGCTCTTCTAAGGGTGTAATTGATAACTCCCAGCCTTTCCAAAAGAACGGTGCTATGATGTTGCTTTTCGGTGCTTTTTATCTGCTCAGTAGATATGCTATTCACTGCACTTGGGTCACATCTGAAGCATACTCATCTCCCTCAATTGTCTTGGCTGCAAGGGGTGCCCACGGCCAGAGGGTCATCTTTGACGATTATCGTGAAGCTTACTTTTGGCTTCGCCAAAACACTCCACCAGATGCTAAGGTTATGTCATGGTGGGATTATGGTTATCAAATCACTGCCATGGGAAACAGAACAGTTATTGTTGACAATAACACCTGGAACAATACACACATAGCAACTGTTGGGCGTGCAATGTCATCTTATGAGGATGAGGCTTATGACATAATGAAATCACTTGATGTTGACTATGTGTTAGTCGTTTTTGGTGGTGTTACTGGTTATTCCTCTGACGATATTAATAAATTTCTATGGATGGTGAGAATTGGCGGTGGAGTTTTTCCTGTAATCAAGGAACCAGATTACCTTGTCAATGGAGAATATCGTGTAGATAAAGGAGCAGCTCCAAAGATGTTGAACTGTCTTATGTACAAGCTGTCTTATTATCGGTTTGGGGAGCTGACAACAGAATATGGCAAACCACCTGGGTATGATCGCGCTAGAGGTGTTGAAATTGGAAACAAGGACATAAAGTTGGAGTACTTGGAGGAGGCATTTACTACTCAGAATTGGATTGTTCGTATTTATAAAGTGAAACCACCTAAAAACAGGTGGTAA 2184 0.4231 MAVTASPPSVTQDLLNSLPKTLKLKTKQQELLLRITTLGLIYILAFITRLFSVLRYESMIHEFDPYFNYRTTLYLTEHGFSEFWNWFDSDSWYPLGRIVGGTLYPGLMLTAAGLYKILHFLRFAVHIREVCVLTAPFFASNTTIVAYFFGKEIWDSGAGIVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLSWALASAFGYFYMVSAWGGYVFIINLVPLYVLVLLVTGRYSLRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMASMGVFFLLQVFFFLDWVKHLLGDVKLFQAFLRITVTSAVGVGAVALGVGMASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLTDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATVKNLTRVVRAKVQPVQGGSGKGTGASKGSSKGVIDNSQPFQKNGAMMLLFGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGAHGQRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYDIMKSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGELTTEYGKPPGYDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKPPKNRW* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2009 727 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 18 727 IPR003674 GO:0004576|GO:0006486|GO:0016020
Mtr6g2009 727 Pfam Oligosaccharyl transferase STT3 subunit 38 513 IPR003674 GO:0004576|GO:0006486|GO:0016020
Mtr6g2009 727 Gene3D - 530 680 - -
Mtr6g2009 727 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B 18 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2009 Mtr-Chr6 36542718 36548886 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2009 13 726 Miscellaneous Gene Families AT1G34130 87.308 0.0 1271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2009 K07151 - gmx:100780916 1317.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2009 6 36542718 36548886 Mtr6g2009 6 36542718 36548886 ECH