Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2008 ATGTCGCCGTCAAATGGGTTGTGTAACGGCGGTGGAAGCGGTGGTGGTGTTAATGGAAATGGGCTGAGTTATATTGAACATCATGTTTCAAAATTTGATACTCTTGCTGGTGTTGCTATTAAGTATGGTGTTGAGGTAGCTGATGTTAAAAGGATGAATGGTTTGGCCTCAGATCTTCAAATGTTTGCACTGAAGACTTTGAGAATTCCACTACCAGGACGACATCCACCATCTCCGGTTCCTGATGAACCTGCCAAGTTGAGAGAAAATAGCAGCGAAAGAAGACCTCCCCGCAATGGTCAATCTGCGATGAAGGAACCTCTCCAGTCCTTAAGACTGAAACCACCTAAACAGAAGATTTCTCCAGCCATGACCATTTTACAGAAATACTATGGACTTGATTCGTCAAATTCTAGAGATACATCTGGAGAAACAGAATTGGCGATGTATACATCTTCTACTTCAGATCATTCCAGAGATGACTGGCTTCCAAAACCCTCACCGATTCCAAATCATCATTCCAAGTCAACAAATTTACCATTTGATCTACTGACCGGGAACGATGAAGTATCAGACTATATGTGTTTTACGGATATCAGCGACGGGGGAGGTGATAGGTCTGACGAGAAATCCGTCCGCAGACGTCAAAAAGCTGATGTTGATAATGGAGGTACTACACCAGAAAGGCTTTTCAAAGAAGGCAATAATAGTAATGGATCAAACGGTTCTTCCTCCAATGGAAAAACATTTTCCATGAGGCCAAAATCAGCAAGTCGAGCCTCTCTGTTTCCCGAGTCATCAGATTCAGGATGGTTAGATTCTATTTCAGTAGGGTTAGGAGATTCAATATTTGTCGATGGACTTTCTGGAGTGCGCAAATCATCGAGTGCATCAAGCCTCAGAGAGCAGGAAAAGTATAATTCAGCAGCAACAGCATGGCCAACCATTTCCAAACCTATCTTTGATGGCTTACCTATCCCAATAACCGGACGCAGAAGTAAAACTGCCCTTGATTAA 1017 0.4297 MSPSNGLCNGGGSGGGVNGNGLSYIEHHVSKFDTLAGVAIKYGVEVADVKRMNGLASDLQMFALKTLRIPLPGRHPPSPVPDEPAKLRENSSERRPPRNGQSAMKEPLQSLRLKPPKQKISPAMTILQKYYGLDSSNSRDTSGETELAMYTSSTSDHSRDDWLPKPSPIPNHHSKSTNLPFDLLTGNDEVSDYMCFTDISDGGGDRSDEKSVRRRQKADVDNGGTTPERLFKEGNNSNGSNGSSSNGKTFSMRPKSASRASLFPESSDSGWLDSISVGLGDSIFVDGLSGVRKSSSASSLREQEKYNSAATAWPTISKPIFDGLPIPITGRRSKTALD* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2008 338 MobiDBLite consensus disorder prediction 198 269 - -
Mtr6g2008 338 CDD LysM 33 69 IPR018392 -
Mtr6g2008 338 MobiDBLite consensus disorder prediction 133 157 - -
Mtr6g2008 338 MobiDBLite consensus disorder prediction 202 222 - -
Mtr6g2008 338 PANTHER LOC443603 PROTEIN-RELATED 19 338 IPR045030 -
Mtr6g2008 338 MobiDBLite consensus disorder prediction 229 269 - -
Mtr6g2008 338 ProSiteProfiles LysM domain profile. 25 69 IPR018392 -
Mtr6g2008 338 SMART LysM_2 26 70 IPR018392 -
Mtr6g2008 338 MobiDBLite consensus disorder prediction 133 177 - -
Mtr6g2008 338 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 19 338 - -
Mtr6g2008 338 MobiDBLite consensus disorder prediction 73 117 - -
Mtr6g2008 338 Gene3D LysM domain 18 76 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2008 Mtr-Chr6 36537512 36541157 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2008 - - aip:107644597 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2008 6 36537512 36541157 Mtr6g2008 6 36537512 36541157 ECH