Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1821 ATGCCTTCCTCCGACGAAGAACCCACCACAAACCCTATACCAAAACACCCCCCACGTTCATCATCAACCTCCACAAAATTCTTCGAAGAAGTACTCAACGGACCAAACCAACGTTGTTTAGAAAATTTCCGAATGGACAAAGTCGTATTCTATAAACTATGTGATATTCTAGAAACCAAGGGTTTATTACGTGACACGAATAGGATTAAAATTGAAGAGCAATTAGCTATTTTTTTGTTCATAATTGGTCATAATTTGAGGATTAGAGGTGTTCAAGAGTTGTTTCACTATTCCGGTGAGACTATTAGTCGGCATTTTAATAATGTTTTGAATGCGGTTATGTCGATTTCTAAAGAGTATTTTCAGCCTCCGGGGGAGGATGTTGCTTCGATGATTGCGGAAGATGATAGGTTTTTTCCGTATTTTAAGGATTGTGTGGGAGCAATTGATGGTATATATGTACCTGTGACCGTTGGTGTAGATGAGCAAGGACCTTTCCGCAATAAGGACGGGTTACTTTCACAAAACGTTCTCGCAGCTTGCTCATTTGACCTCAAGTTTTGTTATGTTTTAGCTGGCTGGGAAGGATCTGCTTCAAACTTACAAGTTTTTAATTCAGCAATCACTAGAAAGAATAAATTGCAGGTCCCTGAAGGTAAATATTACTTAGTAGACAACAAGTTTCCGAATGTGCCAGGTTTCATTGCTCCATACCCCCGTACTCCTTATCACTCCAAGGAATTCCCCACCGGTTACCAACCACAGAATGCATGTGAACTGTTCAATCAACGGCACTCATTATTACGAAGTGTGACTGCTCGAACTTTTGGGGCTTTAAAGGAGCGATTTCCTATATTGATGGCAGCTCCTTCATACCCATTACAGACACAAGTAAAATTAGTGGTGGCAGCTTGTGCGTTACACAATTACATTCGCGGGGAGAAACCAGATGATTGGATTTTTAAGATGTATGAAAAGGATGCATCATTGACAATGGATGAATCACTGCCTCCAATAGAGGTGGAAGTAGATCCGACATCGAATGTTGAGACCCAAAACCAGTATCAGGGTCTTAGTTTTGATGCTGAAGAAATTGCACTCGCATCACAATTAAGGGTCTCTGTTACTGCTGAAATGTGGAACAAATTTATCCAGGACATTTCCCCCATGTAA 1173 0.4066 MPSSDEEPTTNPIPKHPPRSSSTSTKFFEEVLNGPNQRCLENFRMDKVVFYKLCDILETKGLLRDTNRIKIEEQLAIFLFIIGHNLRIRGVQELFHYSGETISRHFNNVLNAVMSISKEYFQPPGEDVASMIAEDDRFFPYFKDCVGAIDGIYVPVTVGVDEQGPFRNKDGLLSQNVLAACSFDLKFCYVLAGWEGSASNLQVFNSAITRKNKLQVPEGKYYLVDNKFPNVPGFIAPYPRTPYHSKEFPTGYQPQNACELFNQRHSLLRSVTARTFGALKERFPILMAAPSYPLQTQVKLVVAACALHNYIRGEKPDDWIFKMYEKDASLTMDESLPPIEVEVDPTSNVETQNQYQGLSFDAEEIALASQLRVSVTAEMWNKFIQDISPM* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1821 390 MobiDBLite consensus disorder prediction 1 24 - -
Mtr6g1821 390 Pfam DDE superfamily endonuclease 164 309 IPR027806 -
Mtr6g1821 390 PANTHER UNCHARACTERIZED 21 390 IPR045249 -
Mtr6g1821 390 PANTHER NUCLEASE HARBI1-LIKE PROTEIN 21 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1821 Mtr-Chr6 33160747 33164402 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1821 - - gmx:100779133 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1821 6 33160747 33164402 Mtr6g1821 6 33160747 33164402 ECH