Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1819 ATGGCGGATCAGAACAAAAAACCTGAGATCTTTGAACTCAACAATGGCACCATGCAGCTCCTTGTTACCAATCTTGGTTGCACTATCACCTCCTTCTCTGTTCCTGCCAAAGATGGTGTGTTATCCGATGTTGTTCTTGGCCTTGACTCTGTTGAATCCTATCAGAAAGGTCTAGCTCCTTATTTTGGCTGCATTGTGGGTCGGGTTGCAAACCGGATTAAGAATGGAAAGTTTACACTTGATGGGGTTGAGTACTCGTTGCCTCTCAACAAAGCCCCAAACACTCTCCACGGTGGAAATGTTGGGTTTGATAAGAAGGTATGGGATGTACTTGAATATAAAAAAGGCGAAACTCCATCAATTACTTTTAAGTATGACAGTCATGATGGAGAGGAAGGTTATCCTGGCGACATCACTGTCACTGCAACTTACACGCTCACCTCAAGCACGACTATGAGGCTCGACATGGAAGGAGTGGCAAAGAACAAGCCAACCATCATTAACTTAGCTCAGCATACCTATTGGAACTTAGCTGGCCATAGCTCAGGGAATATTCTCGATCATTCAATTAAGATATCGGCTAATCATGTCACTCCTGTTGATCAGAACACCGTGCCAACCGGTGAAATTGTGCCCGTGAAGGGTACTCCTTTTGATTTCACATCTGAGAAAAGAATAGGTGATACCATTAATCAAGTTGGTTTAGGATATGACCACAATTACGTGCTTGACTGTGGCGAAGAGAAAGCCGGTTTGAGGCATGCTGCAAAAGTTAGGGATCCATCAAGTTCAAGGGTACTTAACTTGTGGACAAATGCACCTGGGGTGCAATTTTATACTGGAAATTACGTCGACAATGTAACCGGCAAAGGAGGAGCTGTATATGGAAAGCATGCCGGATTATGTCTCGAAACACAAGGATTCCCTGATGCAGTAAACAAACCGAATTTTCCATCCGTTGTTGTTAAACCTGGCGAGAAGTATCAGCATTCTATGTTGTTTGAGTTTTCGATTGAATAA 1020 0.4343 MADQNKKPEIFELNNGTMQLLVTNLGCTITSFSVPAKDGVLSDVVLGLDSVESYQKGLAPYFGCIVGRVANRIKNGKFTLDGVEYSLPLNKAPNTLHGGNVGFDKKVWDVLEYKKGETPSITFKYDSHDGEEGYPGDITVTATYTLTSSTTMRLDMEGVAKNKPTIINLAQHTYWNLAGHSSGNILDHSIKISANHVTPVDQNTVPTGEIVPVKGTPFDFTSEKRIGDTINQVGLGYDHNYVLDCGEEKAGLRHAAKVRDPSSSRVLNLWTNAPGVQFYTGNYVDNVTGKGGAVYGKHAGLCLETQGFPDAVNKPNFPSVVVKPGEKYQHSMLFEFSIE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1819 339 Gene3D - 1 338 IPR014718 GO:0030246
Mtr6g1819 339 PANTHER ALDOSE-1-EPIMERASE 9 338 - -
Mtr6g1819 339 PANTHER ALDOSE 1-EPIMERASE 9 338 - -
Mtr6g1819 339 Pfam Aldose 1-epimerase 11 334 IPR008183 GO:0005975|GO:0016853
Mtr6g1819 339 CDD galactose_mutarotase_like 14 336 - -
Mtr6g1819 339 SUPERFAMILY Galactose mutarotase-like 4 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mtr6g1819 339 PIRSF GALM 1 339 IPR015443 GO:0016853|GO:0019318
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1819 Mtr-Chr6 33106256 33108924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1819 6 337 Miscellaneous Gene Families AT3G47800 50.904 1.53e-111 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1819 K01785 - gmx:100776238 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1819 6 33106256 33108924 Mtr6g1819 6 33106256 33108924 ECH