Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1748 ATGGGTTCCGCTTCTCTTCTCAATTCTTCAGATCCTGGTGTTAAGGACAGCACGAGTAAAGAGGACCCTGTTGTTTCAAACACTGAAGAGGAAGATATGGCTGGTGGCAAGCAAAAGAAGCGAAGTTTGTCAGAGAGCAATGAGCAGCCTGCTCCTACTCGTAAAATGCCCAAACGATCAGCGAGTGCAGCAAGTAAAAATTTGAAGGAGAAGTCTTTTTCTAAATCTGATAAGTCTGATCTTATTGAAACAAAGAAGGATCAGGTTGTAGAAGAAGAATTTCTTGCTGTCCGCATGACTGCTGGACAGGAGGATGGCCGCCCAAATAGAAGACTCACAGACTTTATCCTTCATGATGAATCTGGTGCAGCACAGCAACTTGAGATGCTTGAACTCAATGATTTGTTTATCACTGGACTTATATTGCCACTGGAAGCAAGTACAGACAAGAAAAAAGAGCAAGGCGTCCGATGTGAAGGCTTTGGTCGAATTGAGTCGTGGGATATATCTGGTTATGAAGAGGGTGCTCCAGTGATATGGATTTCTACTGATATTGCTGATTACGATTGCCTGAAACCAGCTGCTAGTTACAAAAAGTATTATGATCAATTCTTTGAAAAGGCTCGTGCTTGCATTGAAGTATATAAAAAGCTAACAAAGTCTGCTGGTGGAGACCCTGACATCAGTCTCGATGAGTTACTTGCTGGGCTGGCACGGACCATGAGTGGTAGCAAGTACTTTTCTGGAGCTGCATCTCTGAAGGAGTTCATCATTTCTCAGGGCGATTTCATTTATAAGCAGCTCATTGGTTTAGACATGACGTTGAAGGCCAATGACAAGGGGTTCACAGAGATTCCTGCTCTTGCTGCTCTTAGAGATGAGAGCAAGAAACAAACAAACTTTGCAAATGCACAAGTGATGCCATCAAATGCAACTTTAAGGATTGGTTCGGGAACCGGGGATGAAGAGAAGAAGGATCAGATGGCTGTAGATGAAGAAGATGAAGATGCAAAGCTAGCAAGACTGTTGCAGGAAGAAGAGTACTGGAAATCAAAGAAGCAGAGGAAAAACCCTAGATCATCCTCGTCATCTAACAAATTCTATATCAAAATCAATGAAGATGAGATAGCAAATGATTACCCTCTCCCTGCTTATTATAAAACTTCTCTTCAAGAAACAGATGAATTTATTGTTTTTGATAACGACTATGATGTGTATGACACTGAAGATCTTCCTAGAAGCATGCTGCATAATTGGGCTTTATACAACTCTGATTCTAGATTGATTTCCTTGGAACTTCTTCCTATGAAACCTTGCTCAGAGATAGATGTTACAATCTTTGGATCAGGTGTAATGACCTCAGATGATGGAAGTGGGTTCAATCTCGATACAGAGGCTGGCCAATCTTCCAGTGCTTCTGGAGAACAGGCCACCGATGGAATTCCAATTTATCTGAGTGCTATAAAAGAATGGATGATTGAATTTGGGTCGTCTATGGTTTTCATATCCATCCGAACAGATATGGCCTGGTATAGACTTGGCAAACCATCAAAGCAGTACTCTCCTTGGTACGACACCGTATTGAAAACTGCAAGGATTGCTATAAGCATTATCACATTGTTGAAGGAGCAGAGCCGTGTATCACGACTTACCTTCGGAGATGTCATAAAAAAAGTATCCGAGTTCAGTCAAGACAATAAGTCATACATTTCTTCTGATCCATTGGCTGTGGAGAGATATGTTGTTGTCCACGGACAGATAATTCTGCAACTGTTTGCAGAATTTCCAGATGAGAAGATCAGGAAGTGTCCTTTTGTGGCCGGTCTTACGAGCAAAATGGAAGCGCGGCACCATACCAAATGGTTGATGAAGAAGAAGAAAGTGTTGCCAAGGAGTGAGCCAAATTTAAATCCCAGGGCAGCAATGGCCCCTGTTGTATCCAAAAGAAAAGCTATGCAAGCAACAACAACGAAGCTGATAAACAAAATATGGGGAGAGTATTACTCAAACCACTTGCCGGAGGATTCAAAAGAGGTAATTGCTAGTGAAGTAAAGGATGATGATGATGAAGCGGAGGAACAGGAACAGGAAGAGAATGATGATGAGGATGCGGAGGTGGAGACAGTACTGTTGGAGGGAATGCAAAAGCCACACTCAGTTTCCAAACAAACTAAAGCGTTTTCTGATGATGGAGAAATTAGATGGGAAGGGGGTCCTGAAGGGAAGACCAGTTCTGGATTGCTTCTTTATAAGCAGGCAATTATTCATGGTGAAGTTGTTTCTATTGGAACATCTGTGTCAGTCGAAGTAGATGAATCGGATGAACTTCCTGATATATATTACGTTGAATATATGTTTGAATCGAAGGGTGGGAAAAAAATGTTTCACGGTAGGATGATGCAGCATGGTTGTCAGACCGTTCTTGGCAATGCAGCTAACGAGAGGGAGGTGTTTTTGACTAATGAGTGCAGGGATTTGGGACTGCAGAATGTTAAGCAGATAAATGTTGCAAGCATCCGAAAAACACCTTGGGGGCATCAACATCGAAAGAATACCATCATTGCAGATAAAATCGACAGGGAAAGAGCAGAAGAAAGTAAAAAGAAAGGACTGCCTACTGAATATTACTGTAAAAGCTTGTATTGGCCTGAAAGAGGTGCTTTCTTTAGCCTTCCGTTTGATACACTTGGTCTAGGGTCTGGCGTTTGTCAATCTTGCCAGTTACAGGAAGCCGAAGAGGAGAAGGACGTTTTCAAAATAAATTCATCCAAGTCTAGTTTTGTATTGGAGGGAACTGAATATTCTCTCAATGACTATGTTTATGTCAGTCCTTTTGAATTTGAGGAAAAAATAGAGCAGGGAACTCATAAGAGTGGGAGGAATGTAGGGCTGAGAGCTTATGTTATATGCCAAGTGCTTGAGATCATTGCAAAGAAGGAAACAAAACAAGCTGAAATAAAATCTACAGATATCAAAGTAAGAAGGTTCTTCCGACCGGAAGATGTATCAAGTGAGAAGGCATACTGTTCTGATGTGCAAGAGGTGTATTACAGTGACGAAGCATGTACAATATCTGTACAATCCATAGAAGGTAAATGTGAAGTCAGGAAAAAGATTGACGTCCCTGAAGGATGTGCCCCCGGAATCTTCCATAATATCTTTTTTTGTGAGCTCTTGTATGATCCTGCCACTGGAGCACTCAAGAAGTTGCCAGCACATATCAAAGTAAAATATTCTACTGGACACACAGCTGATGCTGCAGCTAGAAAGAAAAAGGGAAAATGTAAAGAGGGAGATAACATTTCAGAGCCTGATCCCGAAAGAAAAACATCAAATGAAAAACGTTTAGCAACCTTGGACATTTTTGCAGGATGCGGTGGCTTATCAGAGGGGTTGCATCAGTCTGGTGTTTCATCAACTAAATGGGCTATTGAGTATGAAGAACCAGCTGGGAATGCGTTTAAAGCTAATCATCCTGAAGCATTGGTGTTTATTAACAATTGCAATGTTATTCTTAGGGCTATAATGGAGAAATGTGGAGACATAGATGATTGTATCACAACAACAGAGGCTGCGGAGTTGGCCTCTAAACTTGATGAAAAGGATTTAAGTAATTTACCCTTGCCTGGGCAAGTTGATTTCATTAATGGAGGACCTCCATGCCAGGGTTTCTCTGGGATGAATAGATTTAACACAAGCACCTGGAGTAAAGTTCAGTGTGAGATGATACTGGCGTTCTTATCCTTTGCTGATTATTTCCGGCCAAGGTATTTCCTGTTGGAGAATGTGAGGAACTTTGTGTCTTTTAATAAAGGACAGACATTCCGTTTAACTTTGGCATCACTTCTTGAGATGGGTTATCAGGTGAGGTTTGGTATCCTTGAGGCTGGAGCTTTTGGTGTTTCACAGTCAAGAAAAAGGGCATTTATATGGGCTGCGTCTCCAGAGGACGTGCTTCCAGAGTGGCCAGAACCAATGCATGTCTTTTCTGCTCCTGAATTGAAAATCACATTGTCAGAGAATGTCCAGTATGCTGCCGTCCGCAGTACCGCAAATGGTGCTCCATTACGTGCAATAACTGTTCGTGATACCATTGGTGAACTCCCAGTCGTAGGCAATGGAGCTTCTAGGACAAATATGGAGTACCAAAGCGATCCGGTGTCATGGTTTCAAAAGAAAATTCGAGGCAATATGGCTGTGTTGACTGATCATATATCAAAGGAGATGAATGAGTTGAACTTGATTCGATGTCAGAAAATTCCCAAGAGACCAGGTTGTGATTGGCGTGATCTTCCAGAGGAAAAGATAAAACTGTCAAGTGGACAACTTGTTGATTTGATACCATGGTGCTTGCCAAACACTGCTAAGAGGCATAATCAATGGAAGGGACTGTTTGGTAGGTTGGACTGGCAAGGAAATTTTCCAACTTCCATCACTGACCCTCAACCAATGGGGAAGGTTGGAATGTGCTTCCACCCTGATCAAGATAGAATTCTTACTGTTCGTGAATGTGCCCGATCTCAAGGCTTCCCAGATCGCTATCAGTTTTATGGTAACATCATACACAAGCACAGGCAGATTGGTAATGCTGTTCCCCCTCCTCTGGCATTTGCATTGGGAACAAAACTCAAGGAAGCAGTGGATAGTAAGAGCTCCAAGTTATCATGA 4668 0.4207 MGSASLLNSSDPGVKDSTSKEDPVVSNTEEEDMAGGKQKKRSLSESNEQPAPTRKMPKRSASAASKNLKEKSFSKSDKSDLIETKKDQVVEEEFLAVRMTAGQEDGRPNRRLTDFILHDESGAAQQLEMLELNDLFITGLILPLEASTDKKKEQGVRCEGFGRIESWDISGYEEGAPVIWISTDIADYDCLKPAASYKKYYDQFFEKARACIEVYKKLTKSAGGDPDISLDELLAGLARTMSGSKYFSGAASLKEFIISQGDFIYKQLIGLDMTLKANDKGFTEIPALAALRDESKKQTNFANAQVMPSNATLRIGSGTGDEEKKDQMAVDEEDEDAKLARLLQEEEYWKSKKQRKNPRSSSSSNKFYIKINEDEIANDYPLPAYYKTSLQETDEFIVFDNDYDVYDTEDLPRSMLHNWALYNSDSRLISLELLPMKPCSEIDVTIFGSGVMTSDDGSGFNLDTEAGQSSSASGEQATDGIPIYLSAIKEWMIEFGSSMVFISIRTDMAWYRLGKPSKQYSPWYDTVLKTARIAISIITLLKEQSRVSRLTFGDVIKKVSEFSQDNKSYISSDPLAVERYVVVHGQIILQLFAEFPDEKIRKCPFVAGLTSKMEARHHTKWLMKKKKVLPRSEPNLNPRAAMAPVVSKRKAMQATTTKLINKIWGEYYSNHLPEDSKEVIASEVKDDDDEAEEQEQEENDDEDAEVETVLLEGMQKPHSVSKQTKAFSDDGEIRWEGGPEGKTSSGLLLYKQAIIHGEVVSIGTSVSVEVDESDELPDIYYVEYMFESKGGKKMFHGRMMQHGCQTVLGNAANEREVFLTNECRDLGLQNVKQINVASIRKTPWGHQHRKNTIIADKIDRERAEESKKKGLPTEYYCKSLYWPERGAFFSLPFDTLGLGSGVCQSCQLQEAEEEKDVFKINSSKSSFVLEGTEYSLNDYVYVSPFEFEEKIEQGTHKSGRNVGLRAYVICQVLEIIAKKETKQAEIKSTDIKVRRFFRPEDVSSEKAYCSDVQEVYYSDEACTISVQSIEGKCEVRKKIDVPEGCAPGIFHNIFFCELLYDPATGALKKLPAHIKVKYSTGHTADAAARKKKGKCKEGDNISEPDPERKTSNEKRLATLDIFAGCGGLSEGLHQSGVSSTKWAIEYEEPAGNAFKANHPEALVFINNCNVILRAIMEKCGDIDDCITTTEAAELASKLDEKDLSNLPLPGQVDFINGGPPCQGFSGMNRFNTSTWSKVQCEMILAFLSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEDVLPEWPEPMHVFSAPELKITLSENVQYAAVRSTANGAPLRAITVRDTIGELPVVGNGASRTNMEYQSDPVSWFQKKIRGNMAVLTDHISKEMNELNLIRCQKIPKRPGCDWRDLPEEKIKLSSGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDRYQFYGNIIHKHRQIGNAVPPPLAFALGTKLKEAVDSKSSKLS* 1556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1748 1555 PANTHER DNA (CYTOSINE-5)-METHYLTRANSFERASE 1B 231 1552 - -
Mtr6g1748 1555 PANTHER CYTOSINE-SPECIFIC METHYLTRANSFERASE 231 1552 - -
Mtr6g1748 1555 ProSiteProfiles BAH domain profile. 758 892 IPR001025 GO:0003682
Mtr6g1748 1555 ProSitePatterns C-5 cytosine-specific DNA methylases C-terminal signature. 1525 1543 IPR031303 -
Mtr6g1748 1555 MobiDBLite consensus disorder prediction 312 335 - -
Mtr6g1748 1555 MobiDBLite consensus disorder prediction 682 704 - -
Mtr6g1748 1555 SMART BAH_4 932 1071 IPR001025 GO:0003682
Mtr6g1748 1555 SMART BAH_4 758 892 IPR001025 GO:0003682
Mtr6g1748 1555 Pfam BAH domain 933 1071 IPR001025 GO:0003682
Mtr6g1748 1555 Pfam BAH domain 759 892 IPR001025 GO:0003682
Mtr6g1748 1555 Pfam Cytosine specific DNA methyltransferase replication foci domain 105 239 IPR022702 -
Mtr6g1748 1555 Pfam Cytosine specific DNA methyltransferase replication foci domain 409 561 IPR022702 -
Mtr6g1748 1555 Gene3D DNA Methylase, subunit A, domain 2 1366 1443 - -
Mtr6g1748 1555 Gene3D DNA Methylase, subunit A, domain 2 1444 1509 - -
Mtr6g1748 1555 ProSiteProfiles C-5 cytosine-specific DNA methylase (Dnmt) domain profile. 1116 1550 IPR001525 GO:0008168
Mtr6g1748 1555 PRINTS Cytosine-specific DNA methyltransferase signature 1117 1133 IPR001525 GO:0008168
Mtr6g1748 1555 PRINTS Cytosine-specific DNA methyltransferase signature 1254 1268 IPR001525 GO:0008168
Mtr6g1748 1555 PRINTS Cytosine-specific DNA methyltransferase signature 1300 1313 IPR001525 GO:0008168
Mtr6g1748 1555 Pfam C-5 cytosine-specific DNA methylase 1118 1544 IPR001525 GO:0008168
Mtr6g1748 1555 ProSitePatterns C-5 cytosine-specific DNA methylases active site. 1213 1225 IPR018117 -
Mtr6g1748 1555 MobiDBLite consensus disorder prediction 15 44 - -
Mtr6g1748 1555 Gene3D Vaccinia Virus protein VP39 1121 1324 IPR029063 -
Mtr6g1748 1555 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1118 1545 IPR029063 -
Mtr6g1748 1555 MobiDBLite consensus disorder prediction 318 335 - -
Mtr6g1748 1555 MobiDBLite consensus disorder prediction 1089 1113 - -
Mtr6g1748 1555 CDD BAH_plantDCM_II 927 1128 - -
Mtr6g1748 1555 ProSiteProfiles BAH domain profile. 932 1071 IPR001025 GO:0003682
Mtr6g1748 1555 Gene3D - 910 1120 IPR043151 -
Mtr6g1748 1555 Coils Coil 677 697 - -
Mtr6g1748 1555 MobiDBLite consensus disorder prediction 1 80 - -
Mtr6g1748 1555 TIGRFAM dcm: DNA (cytosine-5-)-methyltransferase 1119 1542 IPR001525 GO:0008168
Mtr6g1748 1555 MobiDBLite consensus disorder prediction 685 704 - -
Mtr6g1748 1555 CDD BAH_DCM_I 755 893 - -
Mtr6g1748 1555 Gene3D - 725 909 IPR043151 -
Mtr6g1748 1555 PIRSF DNMT1 689 962 IPR017198 GO:0003886|GO:0005634|GO:0090116
Mtr6g1748 1555 PIRSF DNMT1 958 1445 IPR017198 GO:0003886|GO:0005634|GO:0090116
Mtr6g1748 1555 PIRSF DNMT1 1439 1554 IPR017198 GO:0003886|GO:0005634|GO:0090116
Mtr6g1748 1555 PIRSF DNMT1 254 395 IPR017198 GO:0003886|GO:0005634|GO:0090116
Mtr6g1748 1555 PIRSF DNMT1 8 291 IPR017198 GO:0003886|GO:0005634|GO:0090116
Mtr6g1748 1555 PIRSF DNMT1 294 686 IPR017198 GO:0003886|GO:0005634|GO:0090116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1748 Mtr-Chr6 32117729 32127053 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1748 K00558 - gmx:100797667 2583.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1748 6 32117729 32127053 Mtr6g1748 6 32117729 32127053 ECH