Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1683 ATGTCCATAAACGAATCCCAAACCCATAATCACAACAATGTCAAAACAAAAACCACACTTTTTCCCTCAAAAAACCACCCAATTTTGACCCTTCATCTCAAAGAACCACAAAACCAAAACTTTCCCACAAATTCAACCACCCTTTTGACCAAAACAATGACTTCAACAAACTCCACTTCAACAGAACCACTTCCTAGTTCAGAAGAACTTGCTGTCAAAGCTGTTAACAAACGATACGAGGGTCTTGTCACTGTTCGAACCAAAGCTGTTAAAGGTAAAGGTGCATGGTATTGGACACACCTTGAACCTATTCTGGTTCGAAATCCTGATACTGGTCTTGCTAAATCTGTTAAACTCAAGTGTTGTTTGTGTGATTCTGTTTTTTCTGCTTCAAACCCTTCAAGAACAGCTTCAGAACATCTCAAACGTGGAACATGCTCTAATTTTAACAATTCTGGTTTGTTGTTAAAATCTGAACCCGGTTCAGTTCCGGTTTCTCCGGTTCCTATTTCGTCGGTCTCCGGTTCGAACCGGAAAAGAGATCAAATGGGAGTTGCTGTTTCAGTTTCAACTTCACCATCATCATTAAGTTTTCAGAATCATAACTTGGCATTGGTTGAAATTGGCTACAATCAGGTGCATGGTAATATGGTGAACCATCAGAATCAGAATCAGAATCACCAGAATCAGAATCAGAATCAGCATCATTTGATGTTGTCTGGTGGAAAAGATGATTTGTGTGCATTGGCTATGTTTGAAGATAGTGTGAAGAAGTTGAAGAGTCCTAAGACTTCACCTGGTACTTCTTTGAGTAAAGAACAGGTGAATTCTGCTTTGGATTTACTTGCTGATTGGTTTTATGAATGTTGTGGTTCTGTTTCTTTGTCAACAATTGAGCATAGAAAGTTTCAAGCTTTTCTTTCTCAAGTTGGTTTGCCTGTAGGAAGTTGTTTGAGACGCGAGGTTTCCGGTCCAAGGCTCGATGCTAGGTTTAATGAAGTTAAGAGTGAATCCGAGGCGAAAATTAGGGATGCGATGTTTTTTCAAGTAGCTAGTGATGGTTGGAAGAGTTATGGTAATAGTAGTAGTAATTTTAATAATAATAGGAGTTTGTATGGTTTGTGTTGTGGTGGTGAGAGTTTGGTTAAGTTTATGGTGAATCTACCAAATGGGAGTAGTGTTTTTGAAAAGGCGGTGTTTACCGGCGGAGGAGTTGTGAATTCGAAGTATGCTGAGGAGGTTTTGTGGGAGACTGTGACTGGTGTTAGTGGTAGTGTTGTTCAAAGATGTGTAGGAATTGTTGCTGATAAGTTTAAGGCTAAGGCATTGAGGAATTTGGAGAATCAAAACCATTGGATGGTAAATACTTCTTGTCAGCTTCAAGGGTTTGTTAGTTTAATCAAGGATTTTAACAACGAGCTCGAACTTTTCGGTATTGTTACTAAGAATTGTCTTAAAGTTGCAAATTTTATAGACAATGAATCTCAGGTGAGGAATGTTTTTGTTAATTATAGAATGCAGGAGATGGAGTATGGCGGGTTGATTCGTGTGCCTTCGCCGAAATGTGATCCGTTGAAGAACTTTGCATCTGTGTTTCCGATGCTTGAGGATATTTTGAGCTGTGCTAGAATAATTCAAATGGTTGTGATGGAGGACGCTTTTAAGGCAATGTTCATGGAGGATCCGAATGCTAGAGAAGTGGCTGGAATGGTTCAGAATGAGGTGTTTTGGAACGAGGTCGAAGCAGTTTATTCGCTTGTGAAGATTATTAAAGGAATGGTTCAGGATATAGAGGCGGAGAGGCCGTTGATCGGTCGATGTTTGCCTCTTTGGGAAGAGATGAGAACCAAAGTGAAGGAGTGGTGTAGTAAATACAATGTTGTCGAAGGACCAGTGGAGAAAATACTCGAAAAACGGTTTCGAAAAAACTACCACGCTGCATGGTCAGCGGCATTTATACTCGATCCACTTTACTTGATTAAAGACACAAGTGGAAAGTATCTCCCGCCATTCAAGTTTCTGACGCGCGAACAAGAGAAAGACGTCGATAAGTTACTTACAAGACTAGCTTCGAGAGAAGAAGCTCATGTTGTTTTGATGGAGCTAATGAAATGGAGATCAGAAGGACTCGACCCTCTTTATGCGCAAGCCGTTCAGATGAAACAAAGAGATCCAATCACCGGGAAGATGAAAGTCGCGAATCCTCTCAGTAGTCGACTTGTTTGGGAAACATGTTTGTGTGAGTTCAAATCTTTAGGGAAGATAGCAGTGAGGCTCATTTTTCTTCATGCAACTTCATGTGGATTTAAGAGTAATTGGTCTTTCATGAGAAAAGTTTCTGGAAACAAAAACTCTAGAGTTGCATTGGAAAGAGCTCAGAAAATGATATACATTGCAGCTCATGCAAAGCTTGAAAGAAGAGATTTTTCTAGTGAGGAAGAAAAAGATGCAGAATTATTTTCCATTTCTGGAAGTGATGAAGATAGCATGCTAGCTGAAGTCTATGCCGATGCAATGCAATCTTAA 2526 0.399 MSINESQTHNHNNVKTKTTLFPSKNHPILTLHLKEPQNQNFPTNSTTLLTKTMTSTNSTSTEPLPSSEELAVKAVNKRYEGLVTVRTKAVKGKGAWYWTHLEPILVRNPDTGLAKSVKLKCCLCDSVFSASNPSRTASEHLKRGTCSNFNNSGLLLKSEPGSVPVSPVPISSVSGSNRKRDQMGVAVSVSTSPSSLSFQNHNLALVEIGYNQVHGNMVNHQNQNQNHQNQNQNQHHLMLSGGKDDLCALAMFEDSVKKLKSPKTSPGTSLSKEQVNSALDLLADWFYECCGSVSLSTIEHRKFQAFLSQVGLPVGSCLRREVSGPRLDARFNEVKSESEAKIRDAMFFQVASDGWKSYGNSSSNFNNNRSLYGLCCGGESLVKFMVNLPNGSSVFEKAVFTGGGVVNSKYAEEVLWETVTGVSGSVVQRCVGIVADKFKAKALRNLENQNHWMVNTSCQLQGFVSLIKDFNNELELFGIVTKNCLKVANFIDNESQVRNVFVNYRMQEMEYGGLIRVPSPKCDPLKNFASVFPMLEDILSCARIIQMVVMEDAFKAMFMEDPNAREVAGMVQNEVFWNEVEAVYSLVKIIKGMVQDIEAERPLIGRCLPLWEEMRTKVKEWCSKYNVVEGPVEKILEKRFRKNYHAAWSAAFILDPLYLIKDTSGKYLPPFKFLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQRDPITGKMKVANPLSSRLVWETCLCEFKSLGKIAVRLIFLHATSCGFKSNWSFMRKVSGNKNSRVALERAQKMIYIAAHAKLERRDFSSEEEKDAELFSISGSDEDSMLAEVYADAMQS* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1683 841 SUPERFAMILY Ribonuclease H-like 429 805 IPR012337 -
Mtr6g1683 841 MobiDBLite consensus disorder prediction 1 20 - -
Mtr6g1683 841 Coils Coil 840 841 - -
Mtr6g1683 841 PANTHER PUTATIVE ISOFORM 1-RELATED 63 837 - -
Mtr6g1683 841 PANTHER OSJNBA0013A04.12 PROTEIN 63 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1683 Mtr-Chr6 31269960 31273121 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1683 - - cam:101508329 1353.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1683 6 31269960 31273121 Mtr6g1683 6 31269960 31273121 ECH