Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1662 ATGCATAAACCTCATAATGATCATCCTCTTCCGCAAGCTGAAACAACATGTGGATCACTTCTTCAAGAACTTCAGATAATATGGCATGAAGTTGGTGAGTCTGAGTCTGAAAAAGATAGGATGTTGTATGAGCTTGAACAAGAGTGTCTAGAAGTATACAGAAGAAAGGTAGATAAAGCAAATTGCTCTAGAGCTCAACTTAGGCAAGAAATTGCTGATTCCGAGGCAGAACTTACAGCTATCTGTTCAGAAATGGGAGAGCGACCTGTACATAGTAGACAGTCTGGTCAAAAGGCTAGAAGCTTGAAGGAAGAGCTAGCAATGATTCTCCCGGAGTTGGAGGAAATGCAAAAACGAAAGTATGAGCGTAGAAATCAATTCAAAGAAGTTCAAGAGCAGATTCACAGTATATCAAACGAGATTTCTGGTCCAAGTGAAAACGTCCCACTCGTTGTAGATGAAACCGATTTGTCATTGAGGAAACTTGAAGAATTGCACAGACAACTTCATACACTTCAAAAGGAGAAGAGTGATCGTCTCAAGAAGGTCCAAGACAATCTGCACACTTTAAGTTCTCTCTGTTCAGTACTTGGTTTAGACTTTAAGCAGACAGTTAGCGAAGTCCATCCTAGTTTAGGAAATTCGGAAGGATCCAGGAGTGTAAATAACGATACCATAAGCCAATTGGCTTTATCTATACAAGAACTGAGAGGAGTGAAATTGCAGAGAATGCAAAAGCTTCAAGATCTAGCAACATCATTATTGGAGCTCTGGAATTTGATGGATACGCCGATTGAAGAACAACAGGTGTTTCAGAATGTTACATGTAACATCGCAGCTTCAGAACATGAAGTAACTGAACCAAACACCTTGTCTGAAGAGTTCATTAATCATGTGGAGGCAGAAGTATCTAGATTAGAGGACTTAAAATCAAGCAAAATGAAAGAGCTTGTTTGGAAAAAAAGAGCCGAGCTAGAGGAGATTTGTAGAAAGACTCATTTGGTTCAAGAATCTGATGCTGCGATCGAAAAGGCTATTGAGTCTGGATCTGTAGACCCTGCTTATGTGCTTGAACAAATTGAGCGTCAGATTTCCCAAGTCAAAGAGGAAGCTTTTAGCAGAATAGAAATACTTGAAAATGTTGAGAAGTGGTTATCGGCATGTGACGAAGAGTCTTGGCTGGAGGAGTATAGCAGAGATGAAAACCGTTACAATGCTGGTAGAGGTACTCATCTAAATCTTAAGCGAGCAGAGAAAGCCCGTATCTTGGTGAACAAAATTCCAGCAATGACAGACAAATTGACTTCAAAAGCAGTAGCATGGGAAAAGGATAAAAGCACCGAGTTCGTATATGATGGTGTCCGTTTAGTTTCTATGCTTGAAGACTACATCTTATTACGGCAAGAAAAGGAGCAAGAACGTCGTAGACAGCGGGACTTGAAGAAACTTCAGGTACAAATGATAGCAGAGCAGGAAGTACTGTATGGGTCGAAAAGCCCTTCAAAGGCCCAGAGTGCAAGAAAAGCGCCTAGGACACCAAATGGAAGTGCGGCTAATAGAAGAGGTACCTTTGGAGGATCAGTGCTAAAACCTGATTCAAAAGCTACTCAATCAAGCTCCACAAGGAAGACTGACAAAGTAAACCAAATTGAGCAAACAAATAACCTAGACGATGCCATTTCATGTTTCTCATCAGCTAGAAGAGGATTTGATATTGCTGATTTCCCTACGAGAAAATACTCATTTGGTGCTGGAATTGTTCGGGATATCGAATCTCCTTTGACACGACAACCTTTTACTACCATCTCATCAACAATATCATCACTAGAGAATGTGGAAAATGCTGCAGATGAATTTAGTATGCAGAAGCAGAATTTGCAGAAAACATTAGCAGCTAACAATTTGCCACTCACTACTACTACTACTATCTCAAAGACAGACGCAGTGGTCGATGAAGAGAATAGAACTCCAAAAGAAAATCCTATTCCTGTCTCCACCACCACTACTACTACACCAAAGACAGTGTCAATTCCTATGAATACAGCCATGACTCCGGCTCATTTCGGAGGTGACTTGATTCAAGATATTGAATATTCCTTTGAGGAAATAAGGCTTGGTTTTTTGTTAGCATGA 2133 0.4046 MHKPHNDHPLPQAETTCGSLLQELQIIWHEVGESESEKDRMLYELEQECLEVYRRKVDKANCSRAQLRQEIADSEAELTAICSEMGERPVHSRQSGQKARSLKEELAMILPELEEMQKRKYERRNQFKEVQEQIHSISNEISGPSENVPLVVDETDLSLRKLEELHRQLHTLQKEKSDRLKKVQDNLHTLSSLCSVLGLDFKQTVSEVHPSLGNSEGSRSVNNDTISQLALSIQELRGVKLQRMQKLQDLATSLLELWNLMDTPIEEQQVFQNVTCNIAASEHEVTEPNTLSEEFINHVEAEVSRLEDLKSSKMKELVWKKRAELEEICRKTHLVQESDAAIEKAIESGSVDPAYVLEQIERQISQVKEEAFSRIEILENVEKWLSACDEESWLEEYSRDENRYNAGRGTHLNLKRAEKARILVNKIPAMTDKLTSKAVAWEKDKSTEFVYDGVRLVSMLEDYILLRQEKEQERRRQRDLKKLQVQMIAEQEVLYGSKSPSKAQSARKAPRTPNGSAANRRGTFGGSVLKPDSKATQSSSTRKTDKVNQIEQTNNLDDAISCFSSARRGFDIADFPTRKYSFGAGIVRDIESPLTRQPFTTISSTISSLENVENAADEFSMQKQNLQKTLAANNLPLTTTTTISKTDAVVDEENRTPKENPIPVSTTTTTTPKTVSIPMNTAMTPAHFGGDLIQDIEYSFEEIRLGFLLA* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1662 710 MobiDBLite consensus disorder prediction 496 550 - -
Mtr6g1662 710 Pfam Microtubule associated protein (MAP65/ASE1 family) 19 513 - -
Mtr6g1662 710 Coils Coil 162 182 - -
Mtr6g1662 710 Coils Coil 609 629 - -
Mtr6g1662 710 MobiDBLite consensus disorder prediction 653 672 - -
Mtr6g1662 710 Gene3D - 364 497 - -
Mtr6g1662 710 Coils Coil 50 84 - -
Mtr6g1662 710 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 8 634 IPR007145 GO:0000226|GO:0008017
Mtr6g1662 710 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 8 634 - -
Mtr6g1662 710 Coils Coil 466 486 - -
Mtr6g1662 710 MobiDBLite consensus disorder prediction 497 521 - -
Mtr6g1662 710 MobiDBLite consensus disorder prediction 530 550 - -
Mtr6g1662 710 Coils Coil 296 316 - -
Mtr6g1662 710 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1662 Mtr-Chr6 30745814 30751340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1662 12 541 EF-hand Containing Proteins AT5G62250 55.657 1.72e-180 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1662 K16732 - gmx:100777734 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1662 6 30745814 30751340 Mtr6g1662 6 30745814 30751340 ECH
Mtr6g1662 6 30745814 30751340 Mtr1g2694 1 38107372 38112841 PCT