Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1621 ATGGCTTGGTATAGAAGAGGAAAGCTTGCTCTTAATGGTTTTCATACCTTGGCTTCTAGTGTTTCATCTCAAAATTCAATTTTACTACCTAGTAACAGAATTTTGCAATCTGGGTATTTGAATTTGGGTAACAAAAATGCTAGTTTTAACGGGTTTTCTTCGTTTTCTTCAATTTTTCAACCTAGTTCGAGAATTTTGCAGTCTGGGTATTTGAATTTGGGTAACAAAGGTGCTAGCTTTAATGGGTTTTCTTCATTTTCTTCAATTTCTAAGAGATTAGGAAAAATGGGTTCTGAAAATAATAAGAATGTTAGAGTTGGTTCTCAAGGTGGAAACTTTAATGGATTTTCTTCGTTTTCTTCAATTTCTAAGAGGTTAGGGAAAATGGGTTTTGAGATTAATAAGAATATCGGGTTGGGTTGCAAAGGTGGTAGCTTTAATGGGTTTTCGTCGTTATCTAAGAATTTTAGAAGATTAGACAAAAAGGGTTTTGAAGTTAATAAGAATTTTAGGAGATTTTACTATGTTGATCCAAAAAATGTGCAGCATTTTAAGCCAAGAGGGCCAAATAATTGGTTTCAGAATCCTAGGCATGTTATGATTGGTGTAGTGGTTGGTTCTGGTGTTTTTATTACTGTGTATTTTGGGAATATGGAAACTGTTCCTTATACGAAGCGAACGCATTTGATTTTGATGCCGAAAGAGATGGAGAAGAGTCTTGGGGAGAGTGAGTTTGAGAAGATGAAGGCAGGTTTTAAGGGGAAGATATTGCCTGCAATGCACCCTGAAAGTGTGAGAGTTAGGATGATAGCGAATGATATTGTCGAGGCGTTGAAGAGAGGGTTGAGTAAGGAGAATGTGTGGAGTGATATAGATTATGCTTCAGAAAATTCTGTGTTTGGTGAAGAAAGTGGGAAGGAGACAATTAATGCATTGACTGAAAATGAAGGGAAAGTTGGAGGGAATTGGCACCGGGAAGATGAAGTTCTTGATGACAAATGGGTTCAGAAGAGTAGGAAAAAGGGTCAGGAGCGAGGGTCGCAACCTAATACGTCGCATTTGGATGGATTGAATTGGGAGATTTTGGTGGTGAATGATCCTATGGTTAATGCCTTTTGCTTACCTGGTGGGAAGATAGTCGTATTTACGGGTTTGCTTGAACATTTTAGAAGTGATGCAGAGATAGCAACTATTATTGGACATGAGGTTGGACATGCTGTGGCCAGACACAGTGCTGAGACGATGACAAAGAGTATGTGGGTTTTAATTCTAAACTTAATACTTTATCAATTCGTCACACCTGATATTGTCAACACTATGTCATCACTTTTCTTACGGCTACCTTTCTCCAGAAGGATGGAAATTGAAGCTGATTATATTGGTCTTCTATTACTTGCATCTGCCGGCTATGATCCACGTGGGGCACCTAAAGTCTATGAGAAGTTGGGAAAAATCTCCGGTGATTCTAAGCTTTTAGATTATTTTGCTACTCATCCATCTGGAAGAAAACGAGCAGAATTACTGGCTCAAGCTCAGGTAATGGATGAAGCTCTTACTATATATAAGACTGTAAGAGAAGGACATGGTGTTGAAGGATTTCTTTAG 1605 0.3819 MAWYRRGKLALNGFHTLASSVSSQNSILLPSNRILQSGYLNLGNKNASFNGFSSFSSIFQPSSRILQSGYLNLGNKGASFNGFSSFSSISKRLGKMGSENNKNVRVGSQGGNFNGFSSFSSISKRLGKMGFEINKNIGLGCKGGSFNGFSSLSKNFRRLDKKGFEVNKNFRRFYYVDPKNVQHFKPRGPNNWFQNPRHVMIGVVVGSGVFITVYFGNMETVPYTKRTHLILMPKEMEKSLGESEFEKMKAGFKGKILPAMHPESVRVRMIANDIVEALKRGLSKENVWSDIDYASENSVFGEESGKETINALTENEGKVGGNWHREDEVLDDKWVQKSRKKGQERGSQPNTSHLDGLNWEILVVNDPMVNAFCLPGGKIVVFTGLLEHFRSDAEIATIIGHEVGHAVARHSAETMTKSMWVLILNLILYQFVTPDIVNTMSSLFLRLPFSRRMEIEADYIGLLLLASAGYDPRGAPKVYEKLGKISGDSKLLDYFATHPSGRKRAELLAQAQVMDEALTIYKTVREGHGVEGFL* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1621 534 PANTHER METALLOENDOPEPTIDASE OMA1 171 526 - -
Mtr6g1621 534 PANTHER METALLOENDOPEPTIDASE OMA1, MITOCHONDRIAL 171 526 - -
Mtr6g1621 534 Pfam Peptidase family M48 357 509 IPR001915 GO:0004222|GO:0006508
Mtr6g1621 534 Gene3D Metalloproteases ("zincins"), catalytic domain 349 417 - -
Mtr6g1621 534 CDD M48C_Oma1_like 355 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1621 Mtr-Chr6 29406879 29412007 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1621 K23010 - gmx:100799127 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1621 6 29406879 29412007 Mtr6g1621 6 29406879 29412007 ECH