Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1536 ATGTTGAGGATGAGGAATAATCATAATCATGGTAATAAGACAAATGGTGTTTCTTCACCTATAAGCTCAGGTGGTTGCAGAGCTGAACCGGGTTCAAATGAATGGGAGATGAGGCCAGGTGGAATGTTGGTTCAAACAAGAACCACTGATTCAAATCGTAACCCTGCTTTGGTTCCTACAATTAGAGTTAGGGTCAAGTTTGGTTCAATTTATCATGAACTCAATATTAGTTCACAAGCCACATTTGGGGATTTGAAGAAAATGTTGTCAGGACCAACTGGTTTACATCATCAAGATCAAAAGTTGTTTTACAAAGACAAAGAGAGGGATTCTAAGGCTTTTCTTGATGTAGTTGGTGTAAAGGACAAATCTAAACTAGTTCTTGTGGAAGATCCTATTAGTCAAGAGAAAAGGATTTTGGAATTGAGGAAGAATGCTAAGATGGAGAAAGCTGCAAAATCTATCTCACAAATTAGCTTGGAAGTAGATAGGCTTGCCGGACGGGTATCTGCTTTTGAATCAATAATTAGCAAAGGTGGGAAAGTTGTAGAATCAGATATGCTTGGTCTTATTGAGCTATTGATGAATCAATTGCTTAAATTGGATGGTATAATTGCTGATGGTGATGTCAAATTGCAAAGGAAAATGCAGGTAAGGAGAGTTCAAAAGTATGTTGAAACATTGGATATGCTAAAAGCTAAGAATTCTATGACAAATAGCAATGATGTTAATGCTCAAGTGCAACCTCAACAAAAGCATTCAAATGGGAAAAGATTGGAAACAATTCAAGAACAACCACAACAAATTCATTCAAATGGATATCATGGGTCAATAGTACCAATTCAAGAACAACAACAAGAACAACCTAGAAAAAACCCAAATGAGCTTTCACTTGTATTTCAGGAACAACAACAACACCAACCCTCAGGAGTTGTAGTTACTACAAAATGGGAGACATTTGATTCTACCCCACCATTAATCACATTTCCATCTACATCCACAACTACTCCTTCAATGACCAATAATAATTCAGGTCCTCCTAAGTTCAGTTGGGAATTCTTTGAGTGA 1068 0.3689 MLRMRNNHNHGNKTNGVSSPISSGGCRAEPGSNEWEMRPGGMLVQTRTTDSNRNPALVPTIRVRVKFGSIYHELNISSQATFGDLKKMLSGPTGLHHQDQKLFYKDKERDSKAFLDVVGVKDKSKLVLVEDPISQEKRILELRKNAKMEKAAKSISQISLEVDRLAGRVSAFESIISKGGKVVESDMLGLIELLMNQLLKLDGIIADGDVKLQRKMQVRRVQKYVETLDMLKAKNSMTNSNDVNAQVQPQQKHSNGKRLETIQEQPQQIHSNGYHGSIVPIQEQQQEQPRKNPNELSLVFQEQQQHQPSGVVVTTKWETFDSTPPLITFPSTSTTTPSMTNNNSGPPKFSWEFFE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1536 355 ProSiteProfiles BAG domain profile. 154 232 IPR003103 GO:0051087
Mtr6g1536 355 SUPERFAMILY BAG domain 114 237 IPR036533 GO:0051087
Mtr6g1536 355 Gene3D BAG domain 131 236 IPR036533 GO:0051087
Mtr6g1536 355 Gene3D - 60 130 - -
Mtr6g1536 355 Pfam BAG domain 155 230 IPR003103 GO:0051087
Mtr6g1536 355 PANTHER BCL2-ASSOCIATED ATHANOGENE 1 336 IPR039773 GO:0051087
Mtr6g1536 355 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Mtr6g1536 355 MobiDBLite consensus disorder prediction 7 26 - -
Mtr6g1536 355 MobiDBLite consensus disorder prediction 324 348 - -
Mtr6g1536 355 ProSiteProfiles Ubiquitin domain profile. 59 129 IPR000626 GO:0005515
Mtr6g1536 355 CDD Ubl_AtBAG1_like 60 129 - -
Mtr6g1536 355 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 3 1 336 - -
Mtr6g1536 355 SMART BAG_1 154 232 IPR003103 GO:0051087
Mtr6g1536 355 SUPERFAMILY Ubiquitin-like 49 135 IPR029071 -
Mtr6g1536 355 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1536 Mtr-Chr6 26705153 26708535 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1536 - - gmx:100819022 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1536 6 26705153 26708535 Mtr6g1536 6 26705153 26708535 ECH