Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1325 ATGCATTTACAAACCCAATCCATCATCATCCACTTCCACACCAACCTTTCATCAGCAGCAAGTCGAAATCGCACTCAATTGCCCGCCAAAACCCAAACCTGCCCGGAAATCTCGGGCGGAGTAAGCCATCAGCCACCGCCACAAGCAGTAATGCTTTCACTCACTAATTCGCCTCTACTTATTGCTAAATCATACCAACAAATTAACATATCAAATAAACGAAGCATTGTGGTATTTGCTGCTGCAAAAGGTCCAAGACCAAGATATCCTCGTGTTTGGAAAACTAATAAAAAAATTGGGACTATTTCTAAGGCTGCTAAGCTTGTTCAATCTATTAAAGAACTTTCAAATGTCAAAGAAGAAGTTTATGGAGCTCTTGATACCTATGTCGCTTGGGAACTAGAATTTCCTATAATTACAGTGAAAAAGGTACTCAAGACTCTAGAATACGAGAAAGAATGGAAGCGGATAATACAGGTAACAAAATGGATGTTAAGCAAGGGTCAAGGAAAGACAATGGGAAGCTATTTTACATTACTTAATGCTTTAGCAGAGGATGACCGAGTTGACGAAGCAGAAGAGCTTTGGACAAAGCTATTAATGCAGTACACAGAAAGCTTGCCACGTAGATTCTTTGATAAAATGATATCTATCTACTGTAAAAGAGGCTTGCATGATAAGATGTTTGAGGTATTTGCAGACATGGAGGAGCTTACTGTTAAACCTAGTAGTTCTGTTGTCTCAATGGTTGGAAATGTCTTCAAGGAGCTAGGTATGATGGATAAATACGAGAAGTTACATAAAAAATATCCACCGCTGCAATACATCAAAGGAAAGCGTGTAAGAATCAGGGTGCAAGGTCAGCCTAATAAAGTCGATAGATACGTAAGAAAGCATGACAATGTTCAACCAAATTCAGGGTTAAGAGAGGAAGATAGTTCAGAAGAGACTTCAGAGTTAACGAACGATGAACAATTCGAACAGGATGCCGATTTAATATGCATGGAAACCAAACAAATTTCAGATGAGTCATCTGAGTTTATGAAACCAAGTTTAGATGTATAA 1065 0.3869 MHLQTQSIIIHFHTNLSSAASRNRTQLPAKTQTCPEISGGVSHQPPPQAVMLSLTNSPLLIAKSYQQINISNKRSIVVFAAAKGPRPRYPRVWKTNKKIGTISKAAKLVQSIKELSNVKEEVYGALDTYVAWELEFPIITVKKVLKTLEYEKEWKRIIQVTKWMLSKGQGKTMGSYFTLLNALAEDDRVDEAEELWTKLLMQYTESLPRRFFDKMISIYCKRGLHDKMFEVFADMEELTVKPSSSVVSMVGNVFKELGMMDKYEKLHKKYPPLQYIKGKRVRIRVQGQPNKVDRYVRKHDNVQPNSGLREEDSSEETSELTNDEQFEQDADLICMETKQISDESSEFMKPSLDV* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1325 354 Pfam PPR repeat 178 199 IPR002885 -
Mtr6g1325 354 Pfam PPR repeat 215 237 IPR002885 -
Mtr6g1325 354 MobiDBLite consensus disorder prediction 293 315 - -
Mtr6g1325 354 PANTHER OS01G0757700 PROTEIN 52 329 - -
Mtr6g1325 354 TIGRFAM PPR: pentatricopeptide repeat domain 213 243 IPR002885 -
Mtr6g1325 354 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 208 242 IPR002885 -
Mtr6g1325 354 PANTHER OS01G0757700 PROTEIN 52 329 IPR044646 -
Mtr6g1325 354 Gene3D Tetratricopeptide repeat domain 103 273 IPR011990 GO:0005515
Mtr6g1325 354 MobiDBLite consensus disorder prediction 293 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1325 Mtr-Chr6 20054690 20059109 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1325 - - mtr:MTR_6g053090 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1325 6 20054690 20059109 Mtr6g1325 6 20054690 20059109 ECH