Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1297 ATGCAGAAAATAGTGCTAAAGGTAGAACTCTATGATGATAGAATCAAGAAAAAAGCCATGAAGACAGTATCTGGTCTTTCAGGGGTTGAGTCTGTTTCAGTGGACATGAAGGATCAAAAACTAACATTAGTTGGAGACATAGATACTGTTGATGTGGTGGGAAAGTTAAGAAAACTATGTCATGCTGAAATAGTTTCTGTTGGACCAGCCAAAGAAGAGAAAAAAGATGAACAAAAGAAAGAAGAAGACAAGAAGGAAGAGCCAAATAAAAAGGACCCAAAAGAAGAATTGGCTGATCTTGTGAAGGCTTTTGAAACACATTATAATCAAATGAGACAACCATATCCTTATTACTATTACCAAACTGTGGAAGAGTCTCCAAGTGGGTGTGTTATTTGTTAA 402 0.3607 MQKIVLKVELYDDRIKKKAMKTVSGLSGVESVSVDMKDQKLTLVGDIDTVDVVGKLRKLCHAEIVSVGPAKEEKKDEQKKEEDKKEEPNKKDPKEELADLVKAFETHYNQMRQPYPYYYYQTVEESPSGCVIC* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1297 133 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 133 - -
Mtr6g1297 133 Gene3D - 1 73 - -
Mtr6g1297 133 MobiDBLite consensus disorder prediction 68 96 - -
Mtr6g1297 133 Pfam Heavy-metal-associated domain 8 58 IPR006121 GO:0046872
Mtr6g1297 133 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 133 - -
Mtr6g1297 133 SUPERFAMILY HMA, heavy metal-associated domain 2 59 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1297 Mtr-Chr6 19437040 19438545 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1297 - - gmx:100306444 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1297 6 19437040 19438545 Mtr6g1297 6 19437040 19438545 ECH