Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1291 ATGATGAAACTAGTATTGAAGGTGGATATACATGATGACAGAACCAAGCAAAAAGCTATGAAGACAGTCTCTGGCCTTTCAGGGGTAGAATCAGTTTCTGTGGACATGAAAGACAAGAAATTAACCTTAACTGGAGACACAGATCCAGTACATGTAGTAAGCAAACTTAGGAAGTGGTGTCATGCTGAAATAGTTTCTGTTGGACCTGCAAAAGATGAAAAGAAGAAAGAAGAACCTAAGCCTGATGTGAAGAAGGACCAAATTCAATTACTTGAAGCCTATCCTCATTATTATTACATGCAACAACCACAATATATTCAATATTCTTCTGTTTCAAGAGTGGAACAAGATCCTGTTGGATGTGTCATATGCTGA 375 0.376 MMKLVLKVDIHDDRTKQKAMKTVSGLSGVESVSVDMKDKKLTLTGDTDPVHVVSKLRKWCHAEIVSVGPAKDEKKKEEPKPDVKKDQIQLLEAYPHYYYMQQPQYIQYSSVSRVEQDPVGCVIC* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1291 124 Pfam Heavy-metal-associated domain 6 58 IPR006121 GO:0046872
Mtr6g1291 124 Gene3D - 1 73 - -
Mtr6g1291 124 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 124 - -
Mtr6g1291 124 SUPERFAMILY HMA, heavy metal-associated domain 2 59 IPR036163 GO:0046872
Mtr6g1291 124 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 3 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1291 Mtr-Chr6 19311983 19312912 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1291 - - gmx:100306170 129.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1291 6 19311983 19312912 Mtr6g1291 6 19311983 19312912 ECH
Mtr6g1291 6 19311983 19312912 Mtr1g3703 1 48682742 48684046 PCT