Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1252 ATGACGGATGTGATACTGCATATATATGATGTAACGAATAGTGGATCCGAGAAAGCTAATAATACCATTCTTCAGATCAATAAGATCTTTAAGGATGGTATTGGTCTTGGTGGCATTTTTCATAGTGCTGTTCAGGTTTTTGGAGAAGATGAATGGTCATTTGGATACTGCGAGCAAGGTAGTGGAGTTTTTAGCTGCCCATCTGGACAGAATCCAATGTATACCTATCGTGAATCCATTGTTCTAGGGAAAACAAACTTTCCCATTTTCAAGGTAAATCAAATAATAAGAGAACTCAGTAGAGAGTGGCCTGGAACTGCATATGATCTGTTGTCCAAAAACTGCAACCACTTCTGTGATGAATTCTGTGAACGGCTCGATGTACCAAAACTTCCAGGTTGGGTTAATAGGTTTGCTAATGCTGGTGATACTGCCATGGAAGTTGCTGGGAATACGGCATTACGGTTCCGACAAGCGAAAACAGAGATTGTATCAGCAAGCAAAGTAGCATACAGGTTCCTCCTAGGCGTTACAAACAACGTTACTAACAATGTTACAAACAATATCAAAACAGGTCCCGATTCCCCCAACAATTCAAACAGGGGGGAGTCATCCCCAAGATTTCAAGCTTCTTGGTTGAAAAACATGATTACCAATGGTGCAAAACCATCTACTAGTTCAGATGCTGAGAATCACAATGGAGCTGTTCCTTTACAACCAACAAGAGAAGATGACAAGGCTCTGCTACATAGTTCATCTTCGCGTCATGATAGTTGA 777 0.4093 MTDVILHIYDVTNSGSEKANNTILQINKIFKDGIGLGGIFHSAVQVFGEDEWSFGYCEQGSGVFSCPSGQNPMYTYRESIVLGKTNFPIFKVNQIIRELSREWPGTAYDLLSKNCNHFCDEFCERLDVPKLPGWVNRFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLLGVTNNVTNNVTNNIKTGPDSPNNSNRGESSPRFQASWLKNMITNGAKPSTSSDAENHNGAVPLQPTREDDKALLHSSSSRHDS* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1252 258 MobiDBLite consensus disorder prediction 243 258 - -
Mtr6g1252 258 MobiDBLite consensus disorder prediction 218 258 - -
Mtr6g1252 258 MobiDBLite consensus disorder prediction 185 206 - -
Mtr6g1252 258 Gene3D PPPDE domains 1 169 IPR042266 -
Mtr6g1252 258 PANTHER DESUMOYLATING ISOPEPTIDASE 1 233 IPR008580 GO:0008233
Mtr6g1252 258 SMART DUF862_2a 2 157 IPR008580 GO:0008233
Mtr6g1252 258 PANTHER PPPDE PUTATIVE THIOL PEPTIDASE FAMILY PROTEIN-RELATED 1 233 - -
Mtr6g1252 258 MobiDBLite consensus disorder prediction 218 234 - -
Mtr6g1252 258 Pfam PPPDE putative peptidase domain 3 147 IPR008580 GO:0008233
Mtr6g1252 258 ProSiteProfiles PPPDE domain profile. 2 148 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1252 Mtr-Chr6 18017125 18021928 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1252 - - mtr:MTR_6g048290 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1252 6 18017125 18021928 Mtr6g1252 6 18017125 18021928 ECH