Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1237 ATGGAAACACCATTGTTGATTAAAAGCTTTACTTCAGAAAATGATTACTTACCTTTGAAAAACTTGAAAGATGTGAAATATGTTTTGTGGAATGAGACATTGAAGATATGGAAGATAGCAATTCCAGTGGCTTTGTCTTTACTTTTTCAGAACCTAATTGGCTCTTCAAATTTCATCTATGCTGGTCATATTGGTGATATTCAGCTCTCTTCTTACTCTGTGTATCAAAGTGTCATCATTACTATCTATTTCTCTATCTTGTATGGTATGTCAAATGCACTAGCAACACTATGTGGCCAAGCTTATGGTGCAGGAAAATTTCAAAATGCTGGTATTTATCTTCAAAGGTCATGGATAGTACTCTTCACCACTTGTATACTCCTCTTGCCAATTCTTCTATATGCAACTCCAATCTTAAAACTTCTTGGTCAAGAAAAAGAGATAGCCGATCTTGCCGGAAAATATGCTATTCTACTAATTCCCTACATGTTTTCCTTCGCCGTCAATTTACCCCTCGTGAAGTTTCTTCAAGCACAAAGCAAAGTTAATGTTATTATGTACATAGCAATGGTTACATTACTCATCCAAAATGGTCTACTTTACATCTTCATCACTGTATTTGATTGGGGAGTGATTGGTTTAGCAATGGCAAGTAATATCTCAGGATGGATATTTTCTATTGCATTGGTAATCTATGCCATTGGTTGGTGTAAAGAAGGATGGAATGGATTGTCTTGGATGGCATTTAGAGAATTATGGGAATTTACCAAACTTAGTCTTGGTTCATCTGTAATGATCTGTTTAGAACAATGGTATACTGCTTGCATTATACTTCTTGCTGGTCATCTTGATAATCCTGTGATTGCTGTTGGTTCCTTTTCGATTTGTGTTCGTGTCTCTAATACACTTGGCATGTCACATCCAAGAGCAGCCAAATACTCTTTCTTGGTGGCAATATCTCAGTCCCTTCTCCTTGGAATCATTTTCATGACTGTTATTTTCTTATGCAAAGAAAAATTTGCCTTCATCTTTACCAATAGTGATGATATAATACATGCTGCAAGTGAATTAGCTTACCTTCTTGGTATGACAATGGTTATCAACAGTATTTCACAAACCATATCAGGTGTGGTAATTGGATGTGGGTGGCAAGTTATGGTTGGTTACATAAATTTGGCATGCTATTATATTGTTGGACTCCCTATTGGAATTTTCCTTGGTTTCAACCAGCATTTAGGTGTCAAGGGTCTCTGGGGAGGAACAATGTGCGGCAATATTCTTCAAATTTTAGTGCTCATAGTCATTATTTATAAGACCAACTGGACCAAAGAGGTAGAGCAAACGGCTAATCGCATGAGAATTTGGAGCTCTAACAACCTTCAAAACGATGTGATTTGA 1398 0.3662 METPLLIKSFTSENDYLPLKNLKDVKYVLWNETLKIWKIAIPVALSLLFQNLIGSSNFIYAGHIGDIQLSSYSVYQSVIITIYFSILYGMSNALATLCGQAYGAGKFQNAGIYLQRSWIVLFTTCILLLPILLYATPILKLLGQEKEIADLAGKYAILLIPYMFSFAVNLPLVKFLQAQSKVNVIMYIAMVTLLIQNGLLYIFITVFDWGVIGLAMASNISGWIFSIALVIYAIGWCKEGWNGLSWMAFRELWEFTKLSLGSSVMICLEQWYTACIILLAGHLDNPVIAVGSFSICVRVSNTLGMSHPRAAKYSFLVAISQSLLLGIIFMTVIFLCKEKFAFIFTNSDDIIHAASELAYLLGMTMVINSISQTISGVVIGCGWQVMVGYINLACYYIVGLPIGIFLGFNQHLGVKGLWGGTMCGNILQILVLIVIIYKTNWTKEVEQTANRMRIWSSNNLQNDVI* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1237 465 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 456 - -
Mtr6g1237 465 Pfam MatE 42 200 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr6g1237 465 Pfam MatE 296 403 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr6g1237 465 CDD MATE_eukaryotic 32 447 IPR045069 GO:0042910|GO:1990961
Mtr6g1237 465 PANTHER PROTEIN DETOXIFICATION 1 456 - -
Mtr6g1237 465 TIGRFAM matE: MATE efflux family protein 42 418 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1237 Mtr-Chr6 17761495 17766740 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1237 K03327 - gmx:100789611 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1237 6 17761495 17766740 Mtr6g1237 6 17761495 17766740 ECH