Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1234 ATGGCTCCTCCTCGAGGTCGTGGTGGGTTTGGAGGAAGAGGAGGTGACAGAGGAGGAAGAGGTGGTGGCGGAGGTAGAGGTTTTGGTGGAGGAAGAGGAGGAGATTTTAAGCCTCGTGGTGGTGGTAGAGGTTTTGGAGGTGGCAGAGGAGCCCGTGGAGGAGGAAGGGGTCGTGGTGGCGGAAGAGGTGGAATGAAAGGAGGTAGCAAGGTTGTTGTTGAGCCTCATAGACACGAAGGTATTTTCATTGCTAAGGGTAAAGAAGATGCTCTTGTTACTAAGAATCTTGTTCCTGGTGAGGCTGTTTATAATGAGAAGAGAGTTTCTGTGCAGAATGAGGATGGTACAAAAGTTGAGTATAGAATTTGGAACCCTTTCCGCTCCAAGTTGGCAGCTGCTGTCCTTGGTGGTGTTGACAACATATGGATTAAACCTGGTGCTAAAGTCCTTTACTTAGGAGCTGCTTCTGGGACAACTGTCTCTCATGTGTCCGATATTGTTGGTCCAACCGGAGTTGTGTATGCAGTAGAATTCTCCCATCGAAGTGGACGTGATTTGGTTAACATGGCTAAGAAACGTACTAATGTCATTCCAATTATTGAGGATGCTAGACATCCAGCCAAGTATAGAATGTTAGTTGGCATGGTAGATGTCATATTTTCTGATGTTGCTCAGCCTGATCAGGCTAGAATATTAGGGCTGAATGCTTCATATTACCTCAAAGCTGGAGGCCACTTTGTTATATCCATCAAGGCCAATTGCATTGATTCGACAGTCCCTGCCGAGGCAGTGTTCAGCAGTGAGGTGAACAAGTTGAAGGCAGATCAATTTAAGCCATTTGAGCAAGTCACTCTCGAACCATTTGAGAGGGACCATGCTTGTGTTGTTGGTGGATACAGAATGCCTAAGAAGAAAAAAGATGCTGAATAG 930 0.4624 MAPPRGRGGFGGRGGDRGGRGGGGGRGFGGGRGGDFKPRGGGRGFGGGRGARGGGRGRGGGRGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNLVPGEAVYNEKRVSVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILGLNASYYLKAGGHFVISIKANCIDSTVPAEAVFSSEVNKLKADQFKPFEQVTLEPFERDHACVVGGYRMPKKKKDAE* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1234 309 ProSitePatterns Fibrillarin signature. 171 185 IPR020813 GO:0003723|GO:0006364|GO:0008168
Mtr6g1234 309 PIRSF Nop17p 38 303 IPR000692 GO:0003723|GO:0006364|GO:0008168
Mtr6g1234 309 PANTHER FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 6 308 - -
Mtr6g1234 309 PRINTS Fibrillarin signature 91 110 IPR000692 GO:0003723|GO:0006364|GO:0008168
Mtr6g1234 309 PRINTS Fibrillarin signature 119 138 IPR000692 GO:0003723|GO:0006364|GO:0008168
Mtr6g1234 309 PRINTS Fibrillarin signature 146 167 IPR000692 GO:0003723|GO:0006364|GO:0008168
Mtr6g1234 309 PRINTS Fibrillarin signature 171 188 IPR000692 GO:0003723|GO:0006364|GO:0008168
Mtr6g1234 309 PRINTS Fibrillarin signature 196 225 IPR000692 GO:0003723|GO:0006364|GO:0008168
Mtr6g1234 309 PRINTS Fibrillarin signature 226 255 IPR000692 GO:0003723|GO:0006364|GO:0008168
Mtr6g1234 309 PRINTS Fibrillarin signature 278 299 IPR000692 GO:0003723|GO:0006364|GO:0008168
Mtr6g1234 309 MobiDBLite consensus disorder prediction 1 70 - -
Mtr6g1234 309 Pfam Fibrillarin 73 300 IPR000692 GO:0003723|GO:0006364|GO:0008168
Mtr6g1234 309 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 71 297 IPR029063 -
Mtr6g1234 309 Hamap Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase [flpA]. 87 300 IPR000692 GO:0003723|GO:0006364|GO:0008168
Mtr6g1234 309 Gene3D Phosphorylase Kinase; domain 1 68 123 - -
Mtr6g1234 309 PANTHER RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN 6 308 - -
Mtr6g1234 309 SMART Fibrillarin_2 73 301 IPR000692 GO:0003723|GO:0006364|GO:0008168
Mtr6g1234 309 Gene3D Vaccinia Virus protein VP39 124 301 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1234 Mtr-Chr6 17723366 17727346 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1234 K14563 - gmx:100814656 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1234 6 17723366 17727346 Mtr6g1234 6 17723366 17727346 ECH