Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1199 ATGGCACTAGCTCCAATTCCAAAAGTTGTTTTAGGTTCAATAGCCTTTGCCATTTTCTGGATATTAGCAGTTTTTCCAGCAGTTCCATTTCTACCAATAGGTAGAACAGCAGGATCTCTTTTAGGTGCAATGCTTATGGTAATATTTCGAGTTATTACTCCGGAAGAAGCGTACGCTGCAATCGATCTTCCAATTCTCGGTCTTCTTTTCGGCACAATGGTTGTTAGTGTTTATCTTGAAAGAGCAGACATGTTCAAATACATAGGAAAATTACTTTCTTGGAAAAGTAAAGGAGCAAAGGATTTACTTTGTAGAATCTGCTTGATTTCAGCTTTATCAAGTGCTCTTTTCACGAACGACACTTCTTGTGTTGTTTTGACTGAATTCATATTGAAAATTGCAAAACAACATAATTTACCACCTCACCCTTTTTTGCTTGCACTTGCTTCAAGTGCTAATATTGGTTCCTCGGCTACGCCAATCGGTAACCCTCAAAATCTTGTTATAGCTGTTGAGAGTAAAATTTCATTCGGAGAGTTTTTGTTTGGTATTGTTCCAGCTATGCTTATAGGAGTTGTAGTTAATGCTTTGATTCTTATAGCTATGTATTGGAAATTGTTATCTGTTCATAAAGATATCGAGGATCCTATTGCGGAAGTTGCAGCTGAAGAAGATGTTAATTCTCATCAATTTTCTCCAGCTACAATGTCTCATTATTCATCATCACTTAATTCTCAAGAGTTGAATGGTTACATAGTAGAATCCTCTAGTATTCAAAATTCTCCTCAAGTTCATAATCTAAGAAACCGATTGGTTTCGAGTGATAGTGAAATCGATAGGTTTCATGTTGGTAGCACAATTGATTCTGCTAGAAATTCAACTGCATCAAAGGAAGGGACTAATAATGACTTGGCTTCTCAAGAGTCGAAAACCGTTGTTGAAGTGGATAGAACAATAGAAGCACATGTTTTGATCTCTTCAGAAGGAAAGGAATATTTAAGCGCCGATTGGAAGCGTAGATTGTGGAAATCTTGTGTTTATATGATTACATTAGGAATGTTGATTGCAATGCTTCTTGGTTTAAATATGTCGTGGACTGCAATTTCGGCTGCATTAGCTTTGGTTGTTCTTGATTTCAAAGATGCTAGGCCATCTTTAGAAAAGGTTTCATATTCACTTTTGATATTCTTTTGTGGAATGTTTATCACAGTAGATGGATTCAACAAAACTGGAATTCCAAGTGCTTTATGGGAGTTGATGGAGCCTTATTCGCGAGTTGATCGTTCTAGTGGAATAGCGATACTTGCTCTTGTTATACTTGTCCTATCAAATTTGGCTTCAAATGTACCAACCGTACTATTGCTTGGAGCAAGAGTAGCAGCTTCAGCAGCTGCAATTTCCCAAGAAGACGAGAAAAGGGCATGGCTCATATTGGCTTGGGTCAGCACTATAGCAGGGAACCTGTCACTATTGGGATCAGCTGCAAACTTGATAGTTTGTGAACAAGCTCGTCGAGCTCCGAACCTATCATACACATTAACCTTCTGGAGTCATTTGAAATTTGGCCTCCCTTCAACTATTATAGTCACTGCTATTGGTTTGACACTCATAAGATGA 1617 0.3791 MALAPIPKVVLGSIAFAIFWILAVFPAVPFLPIGRTAGSLLGAMLMVIFRVITPEEAYAAIDLPILGLLFGTMVVSVYLERADMFKYIGKLLSWKSKGAKDLLCRICLISALSSALFTNDTSCVVLTEFILKIAKQHNLPPHPFLLALASSANIGSSATPIGNPQNLVIAVESKISFGEFLFGIVPAMLIGVVVNALILIAMYWKLLSVHKDIEDPIAEVAAEEDVNSHQFSPATMSHYSSSLNSQELNGYIVESSSIQNSPQVHNLRNRLVSSDSEIDRFHVGSTIDSARNSTASKEGTNNDLASQESKTVVEVDRTIEAHVLISSEGKEYLSADWKRRLWKSCVYMITLGMLIAMLLGLNMSWTAISAALALVVLDFKDARPSLEKVSYSLLIFFCGMFITVDGFNKTGIPSALWELMEPYSRVDRSSGIAILALVILVLSNLASNVPTVLLLGARVAASAAAISQEDEKRAWLILAWVSTIAGNLSLLGSAANLIVCEQARRAPNLSYTLTFWSHLKFGLPSTIIVTAIGLTLIR* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1199 538 PANTHER TRANSPORTER ARSB-RELATED 1 538 - -
Mtr6g1199 538 Pfam Citrate transporter 27 485 IPR004680 GO:0016021|GO:0055085
Mtr6g1199 538 CDD YbiR_permease 28 537 - -
Mtr6g1199 538 PANTHER TRANSPORTER ARSB-RELATED 1 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1199 Mtr-Chr6 16840463 16843060 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1199 - - ccaj:109818851 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1199 6 16840463 16843060 Mtr6g1199 6 16840463 16843060 ECH