Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1198 ATGACGTATGGAACCATTTTTAAAGCGTTGACTATTAGTAGTGACTACCTTGCTCTCGCCAACGAAGGCATACCTTTTGGTTCTGCAACATGGATTGCTTACGCCGGAATATGCTGTTTTCTTGTTCTCTTTGCCGGAGTCATGTCCGGTCTCACACTTGGTCTCATGTCTCTCAGTCTTGTAGACCTCGAAATTCTTGAACGTAGTGGTTCTCCTTCTCAGAAAAAACAAGCTGCAATCATTCTTCCCGTGGTTAAAAAACAACACCAGCTTCTTGTTACTTTGCTTCTCTGTAATGCTGTTTCTATGGAGGCTCTTCCTCTATACCTAGATAAACTCTTCAATCAAGTTCTTGCTATCATTCTCTCTGTTACTTTCGTTCTTTTTTTCGGTGAGGTTATTCCACAAGCAATTTGTAGTAGATATGGTCTTGCTGTAGGTGCCAACTTTTCATGGCTTGTGCGTATTTTAATGATTATATGCTACCCTCTTTCGTATCCGGTTGGAAAGGTTCTGGATTACCTATTGGGGAACGACGAGGCTTTATTTATGCGTGCTCAGTTAAAAGCTCTTGTCTACATTCATGGCATGGAGGCTGGGAAAGGGGGCGAACTTACACATGATGAGACAACAATTATCAGTGGAGCACTTGATTTGACCGAAAAGACTGCTGAGGAGGCTATGACTCCTATCGAATCAACATTTTCTTTAGATGTTAATTCAAAGTTGGACTGGGAGGCATTGGGAAAGATTCTTGCCCGTGGGCACAGCCGAGTTCCTGTCTATTCTGGAAATCCCAGGAATATTATCGGGCTTTTAATTGTAAAAAATCTTCTTACTGTTAGACCTGAAACAGAGACCCCTATCAGTGCAGTATCAATCCGGAGAATACCACGGGTTCCATCTGATATGCCTCTATACGATATACTGAACGAGTTCCAAAAGGGAAGTAGTCATATGGCTGCTGTTGTGAAGACTAGGGGAAAAGGCAAAGAAACTCCACAGCTAATTGATGAAGAGAAATTTGATGCAAAAAAAAGTGTTGGCGGGGATTCACAGTTAACTACTCCATTGCTACAAGAACTGGATTCAAAATCAGAAAATGTTGTTGTTGACATTGACAAGCCTTCAAAACTTACCAGCGCTCCTTCCGAAAATATTGATGGTGAAGTGATTGGTATTATCACTTTGGAAGATGTATTTGAAGAACTTCTGCAAGAAGAAATTGTGGATGAGACGGATGAATATGTTGACGTTCATAACAGAATACGTGTTGCAGCAGTTGCAGCTGCTTCCTCAATGGCACGAGCTCCATCAATCCGAAAATTGACCGGCCAAAAGGGAGTAGGAGGCCAGAGTAAGCCAGTGCAAATTTCAAAGTTATCTTGA 1389 0.4183 MTYGTIFKALTISSDYLALANEGIPFGSATWIAYAGICCFLVLFAGVMSGLTLGLMSLSLVDLEILERSGSPSQKKQAAIILPVVKKQHQLLVTLLLCNAVSMEALPLYLDKLFNQVLAIILSVTFVLFFGEVIPQAICSRYGLAVGANFSWLVRILMIICYPLSYPVGKVLDYLLGNDEALFMRAQLKALVYIHGMEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEALGKILARGHSRVPVYSGNPRNIIGLLIVKNLLTVRPETETPISAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKTRGKGKETPQLIDEEKFDAKKSVGGDSQLTTPLLQELDSKSENVVVDIDKPSKLTSAPSENIDGEVIGIITLEDVFEELLQEEIVDETDEYVDVHNRIRVAAVAAASSMARAPSIRKLTGQKGVGGQSKPVQISKLS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1198 462 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 23 454 IPR045095 GO:0010960
Mtr6g1198 462 Gene3D - 341 412 IPR046342 -
Mtr6g1198 462 PANTHER DUF21 DOMAIN-CONTAINING PROTEIN 23 454 - -
Mtr6g1198 462 Gene3D - 209 338 IPR046342 -
Mtr6g1198 462 Pfam Cyclin M transmembrane N-terminal domain 37 203 IPR002550 -
Mtr6g1198 462 ProSiteProfiles CNNM transmembrane domain profile. 27 209 IPR002550 -
Mtr6g1198 462 CDD CBS_pair_CorC_HlyC_assoc 223 324 IPR044751 -
Mtr6g1198 462 SUPERFAMILY CBS-domain pair 213 406 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1198 Mtr-Chr6 16828538 16833849 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1198 K16302 - gmx:100803705 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1198 6 16828538 16833849 Mtr6g1198 6 16828538 16833849 ECH