Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1054 ATGACCACAATGTCAATTATGAATCCATTTTCTATGAAATTGATTCAAGCCATATTTCTCATATGTTTGGTGTTGCAAGCAGACCAGTTTGTTTGTTCAAAAGAGGTTGTTAGATGCATTCAAAGTGAGAGGCAGGCACTCCTGCAATTCAAGTTTGGCCTTGTTGACAAATTTGGCATGTTGTCATCTTGGACAACAGAAGATTGCTGCGAATGGTATGGAATTGGTTGCAGCAATATCACTGGCCATGTACTTATGCTCGACCTTCATGGTGATTATTATTATTATAATAATAATGATGACAATAATAATTACTATATCAGTGGTGATATCCACAAGTCATTGATGGAGTTGCAACAATTACAATATTTGAACCTCAGTAGAAATAATTTTGAAGGCAATTCTATACTAGGTTTCTTTGGATCTTTAAGAAACCTAAGATACCTTGATCTTTCATATTGTCATTTTGGAGGACAAATTCCTATTCAATTGGAGTCTCTTTCACATTTGAAATACTTGAATCTTTCCAACAATCTTCTAGATGGTTTGATTCCTCATCAACTTGGAGGTCTCTCCAACTTGCAATTTCTTGATCTCAGCCACAATTATTTGGAAGGAAGCATTCCATGTCAACTTGGAAATCTCTCCAACTTGCAATTTCTTGATCTCAGCATCAATTATTTGGAAGGAAGCATTCCATCTCAACTTGGAAATCTCTCCAACTTGCAATTTCTTGATCTCCATGGAAATTTTTTTAAAGGAAAATTACCATCTCAACTTGGAAAGCTTACAAACCTACAAGAGCTTTATCTTGGAAATGAATATGGTGATAGTGGTCTGACTATTGACAACAGGGATCACAACGGAGGTCAGTGGTTGTCTAATCTTACTTCTTTAACCCATCTATTGAAAATGGTTGGTAAGTTACCAAAACTGAGAGAACTAAGTTTACAAAATTGTGGCCTTTCTGATCATTTTATCCATTCATTGAGTCAATCCAAGTTCAACTTTTCCACTTCCCTTTCTATCCTTGATCTATCTGATAACCACTTTGCATCATCCTTGATATTCCATTGGGTGTCAAACATAAGTTCCAATCTTGTAAAGCTTGACCTTTCTATGAACCTTTTGGAGGATCCTCCATCATATGGTTATGGCACAGTGATGAACTCGCTTCAGGAGATTGACCTATCATACAATAAACTGAAGGGTGTGGCGTTTAAGTCCTTCATGAATGTATGCACCTTACGTTCATTAGTTTTGTATGCAAACAATTTCAAAGAAGAACTTCAAACAGTTCTTCACAATTTGTCTGGAGGTTGTGTTAGAAACTCACTTCAAGTGTTAGACCTCAGTTCTAATGGAATCACTGGAACACTGCCTGACCTTTCTGCATTCACATCATTGAAAACATTGGATCTTTCTTCCAATCAACTAAGTGGAGAGATCCCTGGGGGTAGTAGCCTGCCATATCAGTTGGAACATTTATCCATTGCATCAAACACTTTAGAAGGGGTAATTCCTAAATCATTTTGGACGAATGCATGTAAGTTGAAATCATTGGACCTATCATATAACAGATTCAGTGGCACACTACCTGATCTCTCAATATTCTTATTTTTGGAAATGTTTGATATTTCTGAAAATAGACTAAACGGGAAGATATTTGAAGATATTCGATTTCCAACTACACTATGGATACTACGAATGAATTCGAACAATTTAAGTGGTGTGATCTCAGAATTTCATTTTTCTGGTATGTCAATGTTAAAGGAATTAGACTTGTCTGACAATTCACTTGCATTGACATTTACTGAAAATTGGGTCCCACCTTTTCAACTGTACAATATAGGATTGAGATCATGCAAACTTGGTCTTACATTTCCTAAATGGATTCAGACACAAAAGTACCTGCAGGATCTTGATATTTCGAAGGCTGGAATTTCAGATAATGTTCCAGAGTGGTTTTGGGCTAAACTATCATCACAATGGTGCAACAACATCAACATTTCAAACAATAATCTCAAAGGATTAATTCCAAATCTTCAAGTCAAAAATCGTTGTTCTGTTTTATCTCTTTCATCAAATGAATTTGAAGGGCCTATTCCACCATTTCTAAAAGGTTCTACAGTTACTGATTTGTCCAAAAACAAATTCTCTGATTCTCTTCCATTCCTATGTAAAAATGGTATAGATGCAGTGTTAGGCCAGTTTGACCTTTCGAATAATCAATTATCTGGACGAATTCCAAACTGTTGGAGCAATTTCAAGTCATTAGTTTATGTAGATTTGAGCAGCAACAATTTTTCAGGGAAGATTCCTACTTCAATGGGATCACTTGTAGAACTGCAAGCATTCCTATTGAGGAACAACAACTTGACAGGGGAGATCCCTTTCTCCTTAATGAACTGCACAAAGTTAGTAATGCTTGATTTGAGAGACAATAGATTAGAAGGACACATCCCTTATTGGATTGGAAGTGAATTAAAAGAGTTGCAAGTTTTAAGCTTACAAAGAAATCAATTCTATGGAAGTTTACCATTGGAACTCTGCCATCTACAAAAGATTCAACTTTTTGATCTCTCATTAAACAATCTATCTGGGCGAATTCCTAAATGCATTAAAAATTTCACTTCAATGACTCAAAAATCTTCATCACAAGGTTATACACATCATCAATATTATATAACCCGAGGATCTTCGGGTTATGGAGAAGAATATGAACTGAATGCATTCTTGACATGGAAAGGTGTAGAACAAGTGTTCAACAACAATGAATTGTCTCTCCTGAAAAGCATAGATTTATCCAGCAATCACTTTTCAGACGAGATTCCACCTGAAATTGCTGATTTGATCCAATTGGTCTCATTGAACTTATCAAGAAACAACTTCACAGGGAAAATTCCTTCAAGAATTGGAAAGTTAATATCACTTGACTTTCTTGATTTGTCACGAAATAAGTTGCTTGGTTCAATTCCGTCTAGTCTTTCCCGAATAGATCGACTTGCTGTGCTAGATTTGTCACATAATCAATTATCTGGAGAAATTCCAACGAGTACACAACTACAAAGTTTTGATTCCTCATGTTATGAAGATAATCTTGACCTTTGTGGGCTGCCACTTGTAAAACTGTGTGTTGAAGGGAAGCCTCGACATGAAGTAAAATTAAAAATTCAAGACGATGAAGATTTGCTTCTTAATCGTGGATTTTACATCAGTCTGACATTCGGATTTATTATAGGCTTTTGGGGAGTGTTTGGCTCAATCCTAATCAAGCGTTCCTGGAGACATGCTTATTTCAAGTTCATGAACAACTTAGTGGATGCTATTTACGTGAAATGCAGATGGTGGCTCAAAGATTAA 3363 0.3595 MTTMSIMNPFSMKLIQAIFLICLVLQADQFVCSKEVVRCIQSERQALLQFKFGLVDKFGMLSSWTTEDCCEWYGIGCSNITGHVLMLDLHGDYYYYNNNDDNNNYYISGDIHKSLMELQQLQYLNLSRNNFEGNSILGFFGSLRNLRYLDLSYCHFGGQIPIQLESLSHLKYLNLSNNLLDGLIPHQLGGLSNLQFLDLSHNYLEGSIPCQLGNLSNLQFLDLSINYLEGSIPSQLGNLSNLQFLDLHGNFFKGKLPSQLGKLTNLQELYLGNEYGDSGLTIDNRDHNGGQWLSNLTSLTHLLKMVGKLPKLRELSLQNCGLSDHFIHSLSQSKFNFSTSLSILDLSDNHFASSLIFHWVSNISSNLVKLDLSMNLLEDPPSYGYGTVMNSLQEIDLSYNKLKGVAFKSFMNVCTLRSLVLYANNFKEELQTVLHNLSGGCVRNSLQVLDLSSNGITGTLPDLSAFTSLKTLDLSSNQLSGEIPGGSSLPYQLEHLSIASNTLEGVIPKSFWTNACKLKSLDLSYNRFSGTLPDLSIFLFLEMFDISENRLNGKIFEDIRFPTTLWILRMNSNNLSGVISEFHFSGMSMLKELDLSDNSLALTFTENWVPPFQLYNIGLRSCKLGLTFPKWIQTQKYLQDLDISKAGISDNVPEWFWAKLSSQWCNNINISNNNLKGLIPNLQVKNRCSVLSLSSNEFEGPIPPFLKGSTVTDLSKNKFSDSLPFLCKNGIDAVLGQFDLSNNQLSGRIPNCWSNFKSLVYVDLSSNNFSGKIPTSMGSLVELQAFLLRNNNLTGEIPFSLMNCTKLVMLDLRDNRLEGHIPYWIGSELKELQVLSLQRNQFYGSLPLELCHLQKIQLFDLSLNNLSGRIPKCIKNFTSMTQKSSSQGYTHHQYYITRGSSGYGEEYELNAFLTWKGVEQVFNNNELSLLKSIDLSSNHFSDEIPPEIADLIQLVSLNLSRNNFTGKIPSRIGKLISLDFLDLSRNKLLGSIPSSLSRIDRLAVLDLSHNQLSGEIPTSTQLQSFDSSCYEDNLDLCGLPLVKLCVEGKPRHEVKLKIQDDEDLLLNRGFYISLTFGFIIGFWGVFGSILIKRSWRHAYFKFMNNLVDAIYVKCRWWLKD* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1054 1120 Gene3D Ribonuclease Inhibitor 302 439 IPR032675 -
Mtr6g1054 1120 PANTHER BNAC08G45300D PROTEIN 337 484 - -
Mtr6g1054 1120 PANTHER BNAC08G45300D PROTEIN 25 172 - -
Mtr6g1054 1120 PANTHER BNAC08G45300D PROTEIN 149 235 - -
Mtr6g1054 1120 PANTHER BNAC08G45300D PROTEIN 541 1112 - -
Mtr6g1054 1120 PANTHER BNAC08G45300D PROTEIN 235 378 - -
Mtr6g1054 1120 PANTHER BNAC08G45300D PROTEIN 468 555 - -
Mtr6g1054 1120 ProSiteProfiles Leucine-rich repeat profile. 445 467 IPR001611 GO:0005515
Mtr6g1054 1120 Pfam Leucine rich repeat N-terminal domain 41 78 IPR013210 -
Mtr6g1054 1120 ProSiteProfiles Leucine-rich repeat profile. 193 216 IPR001611 GO:0005515
Mtr6g1054 1120 PRINTS Leucine-rich repeat signature 469 482 - -
Mtr6g1054 1120 PRINTS Leucine-rich repeat signature 999 1012 - -
Mtr6g1054 1120 SUPERFAMILY L domain-like 710 1043 - -
Mtr6g1054 1120 PANTHER OS10G0469600 PROTEIN 337 484 - -
Mtr6g1054 1120 PANTHER OS10G0469600 PROTEIN 468 555 - -
Mtr6g1054 1120 PANTHER OS10G0469600 PROTEIN 235 378 - -
Mtr6g1054 1120 PANTHER OS10G0469600 PROTEIN 541 1112 - -
Mtr6g1054 1120 PANTHER OS10G0469600 PROTEIN 149 235 - -
Mtr6g1054 1120 PANTHER OS10G0469600 PROTEIN 25 172 - -
Mtr6g1054 1120 Pfam Leucine Rich repeats (2 copies) 445 479 IPR025875 -
Mtr6g1054 1120 Pfam Leucine rich repeat 165 204 IPR001611 GO:0005515
Mtr6g1054 1120 ProSiteProfiles Leucine-rich repeat profile. 468 490 IPR001611 GO:0005515
Mtr6g1054 1120 SMART LRR_typ_2 829 853 IPR003591 -
Mtr6g1054 1120 SMART LRR_typ_2 239 263 IPR003591 -
Mtr6g1054 1120 SMART LRR_typ_2 389 412 IPR003591 -
Mtr6g1054 1120 SMART LRR_typ_2 191 214 IPR003591 -
Mtr6g1054 1120 SMART LRR_typ_2 309 333 IPR003591 -
Mtr6g1054 1120 SMART LRR_typ_2 167 190 IPR003591 -
Mtr6g1054 1120 SMART LRR_typ_2 975 999 IPR003591 -
Mtr6g1054 1120 SMART LRR_typ_2 215 238 IPR003591 -
Mtr6g1054 1120 SMART LRR_typ_2 466 490 IPR003591 -
Mtr6g1054 1120 SMART LRR_typ_2 927 951 IPR003591 -
Mtr6g1054 1120 SMART LRR_typ_2 118 141 IPR003591 -
Mtr6g1054 1120 Pfam Leucine Rich Repeat 145 161 IPR001611 GO:0005515
Mtr6g1054 1120 Gene3D Ribonuclease Inhibitor 445 582 IPR032675 -
Mtr6g1054 1120 Gene3D Ribonuclease Inhibitor 583 1048 IPR032675 -
Mtr6g1054 1120 SUPERFAMILY RNI-like 104 410 - -
Mtr6g1054 1120 Gene3D Ribonuclease Inhibitor 208 301 IPR032675 -
Mtr6g1054 1120 Gene3D Ribonuclease Inhibitor 39 207 IPR032675 -
Mtr6g1054 1120 ProSiteProfiles Leucine-rich repeat profile. 1001 1023 IPR001611 GO:0005515
Mtr6g1054 1120 SUPERFAMILY RNI-like 390 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1054 Mtr-Chr6 14426237 14430258 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1054 15 1101 Receptor kinase-like Gene Family AT2G15080 31.200 1.74e-99 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1054 - - gmx:100790492 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1054 6 14426237 14430258 Mtr6g1054 6 14426237 14430258 ECH