Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1045 ATGTCAATTATGAATCCATTTTCTATTAAATTGATTCAAGCCATATTTCTCATATGTTTGGTGTTGCAAGCTGACCAGCTTGTTTGTTCAAAAGAGTTTGTTAGGTGCATACAAAGTGAGAGGCAGGCGCTTCTACAATTCAAGGCTGGCCTTACTGATGTGTATGACAACATGCTGTCATCTTGGACGACAGAAGATTGCTGCCAATGGAAGGGAATTGGTTGCAGCAACGTAACTGGTCATGTAATTATGCTCGACCTTCATGGTAATTATTATGGTAATTATAATGATGATTATAATTATATTATCAGGGGTGATATCCACAAGTCATTGGTGGAGTTGCAACAATTACAATATTTGAACCTCAGCGGAAATAATTTTAGAAAGAGTATTCTACCAGGTTTCTTTGGATCTTTAAGAAACCTAAGATACCTTGATCTTTCTAATTGTCATTTTGGAGGACAAATTCATATTCAATTTGAGTCTCTTTCGCATTTGAAATACTTGAATCTTTCGTGGAATCATCTAGATGGTTTGATTCCTCATCAACTTGGAGATCTCTCCAACTTGCAATTTCTTGATCTCAGCTACAATTTTTTGGAAGGAAGCATTCCATCTCAACTTGGAAAGCTTGTGAACCTACAAGAGCTTTATCTTGGAAGCGCGTATTATGACATTGCTAATCTGACAATTGACAACATTATTAATCTGACAATTGACAACAGTACAGATCACAGTGGAGGTCAGTGGTTGTCTAATCTTACTTCTTTAACCCATCTTCATCTGATGTCAATATCTAATCTTGATAAATTTAATAGTTGGTTGAAAATGGTTGGTAAGTTACCAAAACTAAGAGAACTAAGTTTAAGAAATTGTGACCTTTCTGATCATTTTATCCATTCATTGAGTCAATCCAAGTTCAACTTTTCCAATTCTCTTTCTATCCTTGATCTCTCTGTGAACAACTTTGTGTCATCCATGATATTCCCGTTGTTGTCAAACATAAGTTCCAATCTTGTTGAGCTTGACCTTTCTTTCAACCACTTGGAGGCTCCTCCATCAATTGACTATGGCATAGTGATGAATTCTCTTGAGAGACTTGGCCTATCAGGTAATAGATTGAAGGGTGGGGTGTTTAAATCCTTCATGAATGTATGCACCTTAAGTTCTTTAGATCTGAGTCGTCAAAACAATTTAACAGAAGACCTTCAAATAATTCTTCAAAATTTGTCTAGTGGTTGTGTTAGAAACTCACTCCAAGTGTTAGATATCAGTTATAATGAAATCGCTGGAACTTTGCCCGACCTTTCTATATTCACATCATTGAAAACATTGGATCTTTCTTCTAATCAACTAAGTGGAAAGATTCCTGAAGGTAGTAGCTTGCCATTTCAGTTGGAATATTTCGACATCAGATCAAACTCTTTAGAAGGGGGCATTCCAAAATCATTTTGGATGAATGCATGTAAGTTGAAATCATTGACCCTGTCCAAAAACAGATTCAGTGGTGAGCTTCAAGTAATAATCGATCACTTACCTAAATGTGCAAGATACTCACTCCGAGAATTAGATCTAAGCTTTAATCAAATCAATGGGACACAACCCGATCTCTCAATATTCTCCCTTTTGGAAATATTTGATATTTCTAAAAATAGGCTAAGCGGGAAGATATATGAAGATATTCGATTTCCAACCAAACTAAGGACACTACGGATGGGTTCGAACTCTATGAATGGTGTGATCTCTGAATTTCATTTTTCTGGTATGTCAATGTTAAAGGATTTAGACTTGTCAGGCAATTCACTAGCATTGAGATTTAACGAAAATTGGGTGCCACCTTTTCAACTGGACACTATAGGATTGGGATCCTGCATACTCGGACCTACATTTCCTAAGTGGATTAAGACTCAAAAGTACTTGCAATTTCTCGATATTTCTAATGCTGAAATTTCAGATAATGTTCCTGAGTGGTTTTGGGATAATCTATCATTGCAAATGTGCAATACAATAAACATTTCAAACAATAATCTTAAAGGATCAATTCCAAATTTAAAAGTAAAAAATCACTGTTCTCTTTTATCTCTTTCATCAAATGATTTTGAAGGGCCCATTCCACCATTTCTACGAGGTTCTGGACTTATTGATCTATCGAAAAATAAATTCTCAGATTCTCGTTCATTCCTATGTGCAAATGTTATAGATGAAATGTTAGCTCAGTTTGATGTTTCAAATAATCAATTATCTGGACGAATTCCAGACTGTTGGAGCAATTTCAAGTCATTAGTTTATGTAGATTTGAGTCACAACAATTTTTCAGGGATGATTCCAACTTCAATGGGATCACTTGTAAAACTGCGAGCATTACTATTGAGGAACAATAGCTTAACAGAGCAGATCCCTTCCTCCTTAATGAACTGCACAAAGTTAGTAATGCTTGATATGAGAGACAACAGACTAGAAGGAGTCATCCCTTATTGGATTGGAAGCGAGTTAAAAGAGCTGCAGGTTTTAAGCTTACATAGGAATCATTTCTTCGGAAGTTTACCAGTAGAACTTTGCTATCTTCGAAATATTCAACTCTTTGATCTCTCATTAAACAATCTTTCTGGACAAGTTCCTAAATGCATTAAAAATTTCACTTCAATGACTCAGAAAGCTTCAACACAAGATTTTACCGATAATACTTTTATTACTACCAGTGACACTTCGCAATTTATCCGTGAATATCAATTGAATGCATTGTTGACATGGAAAGGTGTAGAACAACTGTTCATCAACAATCGATTTGTTCTTCTAAAAAGCATAGATCTATCAAGCAATCACTTTTCGGAAGAGATTCCACCTGAAATAGCAAATTTGATTCAATTGGTCTCACTAAATTTATCAAGAAACAACTTGACAGGGAAAATTCCTTCAAATATCGGAAGGTTAACATCACTTGAATTTCTTGATTTGTCACAAAACAAGTTGTTTGGTTCAATTCCTTCTAGTCTTTCCCAAATAGATCGGCTTGGTGGGTTAGATGTGTCACATAATCAATTATCTGGTGAAATTCCAAAGAGTACACAACTACAAGGTTTCAATGCCTCATTTTACGAAGATAATCTTGATCTTTGTGGCCCACCACTTGTAAAATTGTGTGTTAAAGTGAAACCACTGCATGATCCAAAAGTAGAAGTTCAAGACGATGACGAACGGCTTCTCAATCGTGGGTTTTACATCAGTCTGACATTTGGATTTATTATAGGCTTCTGGGGTGTATTTGGCTCAATCCTAATCAAGCGCTCCTGGAGACATGCTTATTTCAAGTTCTTGAACAATTTAGTGGATGATGTTTACGTGAAGTGCAGATGGTGGCTCAAATATTAA 3369 0.3574 MSIMNPFSIKLIQAIFLICLVLQADQLVCSKEFVRCIQSERQALLQFKAGLTDVYDNMLSSWTTEDCCQWKGIGCSNVTGHVIMLDLHGNYYGNYNDDYNYIIRGDIHKSLVELQQLQYLNLSGNNFRKSILPGFFGSLRNLRYLDLSNCHFGGQIHIQFESLSHLKYLNLSWNHLDGLIPHQLGDLSNLQFLDLSYNFLEGSIPSQLGKLVNLQELYLGSAYYDIANLTIDNIINLTIDNSTDHSGGQWLSNLTSLTHLHLMSISNLDKFNSWLKMVGKLPKLRELSLRNCDLSDHFIHSLSQSKFNFSNSLSILDLSVNNFVSSMIFPLLSNISSNLVELDLSFNHLEAPPSIDYGIVMNSLERLGLSGNRLKGGVFKSFMNVCTLSSLDLSRQNNLTEDLQIILQNLSSGCVRNSLQVLDISYNEIAGTLPDLSIFTSLKTLDLSSNQLSGKIPEGSSLPFQLEYFDIRSNSLEGGIPKSFWMNACKLKSLTLSKNRFSGELQVIIDHLPKCARYSLRELDLSFNQINGTQPDLSIFSLLEIFDISKNRLSGKIYEDIRFPTKLRTLRMGSNSMNGVISEFHFSGMSMLKDLDLSGNSLALRFNENWVPPFQLDTIGLGSCILGPTFPKWIKTQKYLQFLDISNAEISDNVPEWFWDNLSLQMCNTINISNNNLKGSIPNLKVKNHCSLLSLSSNDFEGPIPPFLRGSGLIDLSKNKFSDSRSFLCANVIDEMLAQFDVSNNQLSGRIPDCWSNFKSLVYVDLSHNNFSGMIPTSMGSLVKLRALLLRNNSLTEQIPSSLMNCTKLVMLDMRDNRLEGVIPYWIGSELKELQVLSLHRNHFFGSLPVELCYLRNIQLFDLSLNNLSGQVPKCIKNFTSMTQKASTQDFTDNTFITTSDTSQFIREYQLNALLTWKGVEQLFINNRFVLLKSIDLSSNHFSEEIPPEIANLIQLVSLNLSRNNLTGKIPSNIGRLTSLEFLDLSQNKLFGSIPSSLSQIDRLGGLDVSHNQLSGEIPKSTQLQGFNASFYEDNLDLCGPPLVKLCVKVKPLHDPKVEVQDDDERLLNRGFYISLTFGFIIGFWGVFGSILIKRSWRHAYFKFLNNLVDDVYVKCRWWLKY* 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1045 1122 SUPERFAMILY L domain-like 734 1045 - -
Mtr6g1045 1122 SMART LRR_typ_2 831 855 IPR003591 -
Mtr6g1045 1122 SMART LRR_typ_2 139 162 IPR003591 -
Mtr6g1045 1122 SMART LRR_typ_2 977 1001 IPR003591 -
Mtr6g1045 1122 SMART LRR_typ_2 187 211 IPR003591 -
Mtr6g1045 1122 SMART LRR_typ_2 163 186 IPR003591 -
Mtr6g1045 1122 SMART LRR_typ_2 953 976 IPR003591 -
Mtr6g1045 1122 SMART LRR_typ_2 439 463 IPR003591 -
Mtr6g1045 1122 SMART LRR_typ_2 361 381 IPR003591 -
Mtr6g1045 1122 SMART LRR_typ_2 114 138 IPR003591 -
Mtr6g1045 1122 SMART LRR_typ_2 782 806 IPR003591 -
Mtr6g1045 1122 SMART LRR_typ_2 929 952 IPR003591 -
Mtr6g1045 1122 Gene3D Ribonuclease Inhibitor 204 414 IPR032675 -
Mtr6g1045 1122 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Mtr6g1045 1122 SMART LRR_sd22_2 336 357 - -
Mtr6g1045 1122 SMART LRR_sd22_2 806 824 - -
Mtr6g1045 1122 SMART LRR_sd22_2 977 1003 - -
Mtr6g1045 1122 SMART LRR_sd22_2 540 563 - -
Mtr6g1045 1122 SMART LRR_sd22_2 187 216 - -
Mtr6g1045 1122 SMART LRR_sd22_2 439 462 - -
Mtr6g1045 1122 PRINTS Leucine-rich repeat signature 442 455 - -
Mtr6g1045 1122 PRINTS Leucine-rich repeat signature 977 990 - -
Mtr6g1045 1122 SUPERFAMILY L domain-like 66 491 - -
Mtr6g1045 1122 PANTHER OS10G0469600 PROTEIN 541 1114 - -
Mtr6g1045 1122 PANTHER OS10G0469600 PROTEIN 145 217 - -
Mtr6g1045 1122 PANTHER OS10G0469600 PROTEIN 208 303 - -
Mtr6g1045 1122 PANTHER OS10G0469600 PROTEIN 24 170 - -
Mtr6g1045 1122 PANTHER OS10G0469600 PROTEIN 465 557 - -
Mtr6g1045 1122 PANTHER OS10G0469600 PROTEIN 309 458 - -
Mtr6g1045 1122 Pfam Leucine rich repeat 932 990 IPR001611 GO:0005515
Mtr6g1045 1122 Pfam Leucine rich repeat 760 819 IPR001611 GO:0005515
Mtr6g1045 1122 Pfam Leucine rich repeat 164 220 IPR001611 GO:0005515
Mtr6g1045 1122 Pfam Leucine rich repeat 109 152 IPR001611 GO:0005515
Mtr6g1045 1122 Gene3D Ribonuclease Inhibitor 417 705 IPR032675 -
Mtr6g1045 1122 ProSiteProfiles Leucine-rich repeat profile. 441 463 IPR001611 GO:0005515
Mtr6g1045 1122 Pfam Leucine Rich repeat 440 455 IPR001611 GO:0005515
Mtr6g1045 1122 Pfam Leucine Rich repeat 519 532 IPR001611 GO:0005515
Mtr6g1045 1122 Gene3D Ribonuclease Inhibitor 712 1052 IPR032675 -
Mtr6g1045 1122 Gene3D Ribonuclease Inhibitor 36 203 IPR032675 -
Mtr6g1045 1122 PANTHER BNAC08G45300D PROTEIN 465 557 - -
Mtr6g1045 1122 PANTHER BNAC08G45300D PROTEIN 309 458 - -
Mtr6g1045 1122 PANTHER BNAC08G45300D PROTEIN 24 170 - -
Mtr6g1045 1122 PANTHER BNAC08G45300D PROTEIN 145 217 - -
Mtr6g1045 1122 PANTHER BNAC08G45300D PROTEIN 208 303 - -
Mtr6g1045 1122 PANTHER BNAC08G45300D PROTEIN 541 1114 - -
Mtr6g1045 1122 SUPERFAMILY L domain-like 416 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1045 Mtr-Chr6 14250577 14253945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1045 12 1103 Receptor kinase-like Gene Family AT2G15080 30.680 1.09e-89 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1045 - - mtr:MTR_6g038730 1553.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1045 6 14250577 14253945 Mtr6g1045 6 14250577 14253945 ECH