Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1026 ATGGCAGCTAAACGCGTTTATGAAGCATGGAAAGGAAGTAATAAATTCCTATTTGGAGGAAGGCTGATATTTGGGCCTGATGCTAAGTCATTGCTTATCAGTTTGTTGCTGGTCATAGTTCCGGTTATCATCTTTTGTGTATTCGTAGCAAGGCATCTTCGGCACCATTTTTCTTCATATAATGCAGGATATGCTATTTTGGTGGTGGCAGTTATCTTCAATATTTATGTGCTGATACTTCTCTTCCTTACTTCGGCACGCGATCCGGGGATTATTCCTAGGAATTTACATCCGCCTGAGGAAGAGTTCCGTTATGACTCGTCCGTTTCTATTGACATTGGGGGAAGACAAACACCAAGCCTTCAGTTCCCTCGAACAAAGGAAGTAATGGTCAATGGCCTTCCTGTAAGAGTGAAGTATTGTGATACATGCATGCTGTATCGCCCTCCTCGTTGCTCACATTGCTCCATTTGCAACAATTGTGTTGAACGTTTTGATCATCATTGCCCTTGGGTTGGCCAATGCATTGGACTGAGGAACTACCGTTACTTCTTTATGTTTGTTTCTTCGGCCACTCTTCTATGCATCTATGTGTTTTCAATCTCAGCTTTTTACATCAAGGTTTTGATGGATGAGAATCATGGGACAGTGTGGAAGGCAATGAAAGAATCTCCTGCATCTGTCATACTAATGGCATATTGTTTCATCTCTTTGTGGTTTGTTGGTGGACTAACTGGCTTTCATTTGTACCTTATTGGCACAAACCAGACCACCTATGAAAACTTCCGATACAGAGCAGATAACAGGATCAATGTTTACAATCGGGGGTGTTTAAATAATTTTCTGGAAGTATTTTGTACAAAAGTGAAGCCTTCAAGGAACAATTTTCGGGCTTTAGTTCAAGAGGAGGTACAGAGGCCACCTCCTCGGGTAGTTACCCCCCGGGAACCTGAACAAGATGTAGGTGGAGATCCTCGTTCTAAGGTTGAAGATGATCTTGACATCGGTGAAGACCTATTGAAGATATCACAGCGGCGGAATATTGAAGAAATCGATGAAGACATTCGGAGCAGAGGGAGCAATGGACCTTACAACAATGCATCTGAAGGTGATTCAGTTTTGGGCTCAGATCGTCGAGCTCCAACAGTTCAAACAGAAGAAAGGCACTCAAGTTGGAGAAGAAGCGGAAGCTGGGAAATTGCACCAGATGTACTTGCCAATTCAAATGTAACTGAAACTAGAAGCTATGTTTCTGCGCGTCAATGA 1266 0.4281 MAAKRVYEAWKGSNKFLFGGRLIFGPDAKSLLISLLLVIVPVIIFCVFVARHLRHHFSSYNAGYAILVVAVIFNIYVLILLFLTSARDPGIIPRNLHPPEEEFRYDSSVSIDIGGRQTPSLQFPRTKEVMVNGLPVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSATLLCIYVFSISAFYIKVLMDENHGTVWKAMKESPASVILMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADNRINVYNRGCLNNFLEVFCTKVKPSRNNFRALVQEEVQRPPPRVVTPREPEQDVGGDPRSKVEDDLDIGEDLLKISQRRNIEEIDEDIRSRGSNGPYNNASEGDSVLGSDRRAPTVQTEERHSSWRRSGSWEIAPDVLANSNVTETRSYVSARQ* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1026 421 PANTHER S-ACYLTRANSFERASE 6 421 - -
Mtr6g1026 421 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 421 - -
Mtr6g1026 421 MobiDBLite consensus disorder prediction 317 333 - -
Mtr6g1026 421 ProSiteProfiles DHHC domain profile. 139 189 - -
Mtr6g1026 421 MobiDBLite consensus disorder prediction 352 396 - -
Mtr6g1026 421 MobiDBLite consensus disorder prediction 300 333 - -
Mtr6g1026 421 Pfam DHHC palmitoyltransferase 139 263 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1026 Mtr-Chr6 13998366 14007522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1026 65 285 Lipid Metabolism Gene Families AT4G22750 27.586 2.63e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1026 K16675 - gmx:100818705 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1026 6 13998366 14007522 Mtr1g3631 1 47937750 47942164 PCT