Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0873 ATGTACGTTGTACCACCACCTCAGAGATCTGATCCAGCTTCAGGATCTGATGATTTGCTTGTTTATCAAGCTTGGAAGGGTTCTAATAAATTTTTTCTTCAGGGAAGGTTCATATTTGGACCGGATGCAAGATCATTGGGCTTGACAATTTTTCTTATTGTTGCTCCAGTTATAGTGTTCTGTGTCTATGTTGCCAGAAAATTTTTCGTTGATTATCCTCATCACTGGGGGGTATCCATAATGGCAGTTGCTATTATCTTCACAATTTATGTCATAGGTCTTCTCTTTTCAACATCTGCACGTGACCCTGGCATAATCCCGCGTAATGCACATCCGCCAGAGCCAGAAGGTGTTGAAGGCGGTCTAGAGGTTGGATCTGGTCAAACTCCTCAATTGCGGTTGCCTCGTATTAAGGAGGTTGAGGTCAATGGAATTTCTGTTAAAGTTAAGTATTGTGATACTTGCATGCTCTACAGACCTCCTCGATGCTCTCACTGCTCAATTTGCAACAACTGTGTAGAGAGGTTTGATCACCACTGTCCCTGGGTTGGGCAGTGCATTGGGCTGCGTAATTATCGCTTCTTCTTCATGTTTGTCTTCTCAGCTACGCTACTTTGTATATATGTTTTCGCATTTTGTTGGGTCTATATTAGAAGAATTATGAAAGCTGAGGAGACAACAATTTGGAAGGCAATGATCAAAAGTCCAGCCTCCATAGTCTTAATAATCTATACCTTCATCTGCATGTGGTTTGTTGGTGGCCTTACTGCCTTTCATTTATATCTCATAAGTACAAATCAGACTACATACGAGAACTTCAGATACCGGTATGATCGACGGGCCAACCCGTACAACAAAGGAGTGTTCGATAATTTCAAAGAGATTTTCTTCACCAGCATTCCCCCATCAAAGAATAATTTCAGGGCAAAGGTGCCAGTGGAACCAGTATTACCCGCTCGATCAGTGGGTGGCGGCTTTATGAGTCCAAGTATGGGAAAAGCTGTTGACGACATAGAAATGGGAAGAAAAACAGTATGGGCGGGTGACATGGGTAGCAGCATTGATCATTGTGAAGGTCAGTTAAACAATCGCGGGGCTATAAAGGATGGGGAGTTTGACGAACTGTCTCCAGAAATTAGGACAACAGTAGATGAGACAAGTGACCGTGTTGGAATACATCCTAGGAGATCTAGCTGGGGAAGAAAAAGCGGAAGCTGGGATATGTCCCCTGAAGTTCTTGCTTTGGCAGCTAGGGTTGGAGAACCAAATCGTGTCGGTGGAAGTAGCAGCAGTTTGAGCACTGAGAACAGACATTCATAG 1320 0.4356 MYVVPPPQRSDPASGSDDLLVYQAWKGSNKFFLQGRFIFGPDARSLGLTIFLIVAPVIVFCVYVARKFFVDYPHHWGVSIMAVAIIFTIYVIGLLFSTSARDPGIIPRNAHPPEPEGVEGGLEVGSGQTPQLRLPRIKEVEVNGISVKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRFFFMFVFSATLLCIYVFAFCWVYIRRIMKAEETTIWKAMIKSPASIVLIIYTFICMWFVGGLTAFHLYLISTNQTTYENFRYRYDRRANPYNKGVFDNFKEIFFTSIPPSKNNFRAKVPVEPVLPARSVGGGFMSPSMGKAVDDIEMGRKTVWAGDMGSSIDHCEGQLNNRGAIKDGEFDELSPEIRTTVDETSDRVGIHPRRSSWGRKSGSWDMSPEVLALAARVGEPNRVGGSSSSLSTENRHS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0873 439 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 12 436 - -
Mtr6g0873 439 MobiDBLite consensus disorder prediction 424 439 - -
Mtr6g0873 439 MobiDBLite consensus disorder prediction 383 439 - -
Mtr6g0873 439 Pfam DHHC palmitoyltransferase 150 274 IPR001594 GO:0016409
Mtr6g0873 439 PANTHER S-ACYLTRANSFERASE 12 436 - -
Mtr6g0873 439 ProSiteProfiles DHHC domain profile. 150 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0873 Mtr-Chr6 11157158 11161710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0873 79 312 Lipid Metabolism Gene Families AT4G22750 27.668 2.36e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0873 - - gmx:100799812 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2473 7 41197136 41199555 Mtr6g0873 6 11157158 11161710 PCT