Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0693 ATGGTCATGGACAAGGTGACTCAATACATACGTGTGTTCAACCACTTTGATGAAAATGGAGATGGAAAAATATCATCATCGGAGCTGCGGCAATGTGTTGAGGCAATCGGGGCAAAGATGTCAAACGAGGAGGCGGAAATGGCGGTTGAGCTTCTCGACTCGGACGGGGATGGGTTGATTGGGTTGGATGATTTTGTGAAGTTTGTAGAGGGAGGGAAAGAGGAAGAGAAAGTAAATGACCTAAGAGAGGCTTTTAAGATGTATGAAATGGAAGGATGTGGTTGCATCACACCAAAGAGTCTAAAGAGAATGCTTGGAAGATTGGGTGAGTGTAGAAGTGTAGATGAATGTCAAGCTATGATTTCTCAATTTGATATTGATGGAGATGGGGTCCTTAGTTTTGATGAATTTAGGACAATGATGCTTTAA 429 0.4242 MVMDKVTQYIRVFNHFDENGDGKISSSELRQCVEAIGAKMSNEEAEMAVELLDSDGDGLIGLDDFVKFVEGGKEEEKVNDLREAFKMYEMEGCGCITPKSLKRMLGRLGECRSVDECQAMISQFDIDGDGVLSFDEFRTMML* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0693 142 SUPERFAMILY EF-hand 7 142 IPR011992 -
Mtr6g0693 142 ProSitePatterns EF-hand calcium-binding domain. 125 137 IPR018247 -
Mtr6g0693 142 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Mtr6g0693 142 ProSiteProfiles EF-hand calcium-binding domain profile. 76 111 IPR002048 GO:0005509
Mtr6g0693 142 Gene3D - 72 142 - -
Mtr6g0693 142 SMART efh_1 8 36 IPR002048 GO:0005509
Mtr6g0693 142 SMART efh_1 80 108 IPR002048 GO:0005509
Mtr6g0693 142 SMART efh_1 44 72 IPR002048 GO:0005509
Mtr6g0693 142 SMART efh_1 116 142 IPR002048 GO:0005509
Mtr6g0693 142 ProSiteProfiles EF-hand calcium-binding domain profile. 40 75 IPR002048 GO:0005509
Mtr6g0693 142 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 4 142 - -
Mtr6g0693 142 Gene3D - 2 71 - -
Mtr6g0693 142 Pfam EF-hand domain pair 94 141 IPR002048 GO:0005509
Mtr6g0693 142 CDD EFh 11 69 IPR002048 GO:0005509
Mtr6g0693 142 CDD EFh 80 141 IPR002048 GO:0005509
Mtr6g0693 142 ProSitePatterns EF-hand calcium-binding domain. 53 65 IPR018247 -
Mtr6g0693 142 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 4 142 - -
Mtr6g0693 142 ProSiteProfiles EF-hand calcium-binding domain profile. 112 142 IPR002048 GO:0005509
Mtr6g0693 142 ProSitePatterns EF-hand calcium-binding domain. 17 29 IPR018247 -
Mtr6g0693 142 Pfam EF-hand domain pair 10 69 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0693 Mtr-Chr6 8446604 8447435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0693 4 141 EF-hand Containing Proteins AT1G76650 48.551 1.86e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0693 K13448 - zju:107427847 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0693 6 8446604 8447435 Mtr6g0693 6 8446604 8447435 ECH
Mtr7g0715 7 11048066 11048797 Mtr6g0693 6 8446604 8447435 PCT