Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3542 ATGATGATGATGAGACATAGTTGTTGTGTCATGGTGATTGTTTTGATTGGGATGTTGTTGAATTGGAAAGAAACAGAAGGGATAAGATTTGTGATAGATAGAGATGAATGTTTCTCACATGATGTTAAGTATGAAGGTGACACTGTTCATGTTTCTTTTGTTGTTATTAAGGCTGATTCTCCTTGGCATTATGGTGATGAAGGTGTAGATCTTGTGGTAAAGGGGCCGGCTGGTGAACAAATTCAAGATTTTCGTGACAAGACCAGTGATAAATTTGAATTTGTTGCTCACAAACCAGGAGTTCATAAGTTCTGTTTCACCAACAAATCTCCTTATCATGAGACCATCGATTTTGATGTCCATGTTGGTCACTTCTCTTACTTCGAGCAACATGCCAAAGATGAGCATTTCAACCCTTTGCTAGAGCAGATAGCAAAGTTGGAAGAAGCTCTTTACAATATTCAGTTTGAACAACATTGGTTAGAAGCTCAAACCGACCGCCAAGCAATAGTGAATGATGGGATGAGCCGAAGAGCAGTACACAAAGCAATCTTTGAATCAGCAGCACTGATTGGAGCTAGTGCACTGCAAGTTTATCTTCTGCGACGCTTGTTTGAGCGAAAGTTGGGAACCTCAAGAGTTTAG 645 0.4 MMMMRHSCCVMVIVLIGMLLNWKETEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVDLVVKGPAGEQIQDFRDKTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVHVGHFSYFEQHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAALIGASALQVYLLRRLFERKLGTSRV* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3542 214 ProSiteProfiles GOLD domain profile. 35 122 IPR009038 -
Mtr5g3542 214 PANTHER TMP21-RELATED PROTEIN-RELATED 3 210 - -
Mtr5g3542 214 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 3 210 IPR015720 -
Mtr5g3542 214 Pfam emp24/gp25L/p24 family/GOLD 35 206 IPR009038 -
Mtr5g3542 214 SMART EMP24_GP25L_2 27 206 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3542 Mtr-Chr5 44224457 44228143 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3542 - - gsj:114403744 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3542 5 44224457 44228143 Mtr5g3542 5 44224457 44228143 ECH