Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3473 ATGATGGGATTAGATTCAAGTGATAACATCAACACCCCTTTGTTACTCACTCAATCTCAATCTCATCCTATCAAAAGAACAGGGACTTTATGGACAGCAGTAGCACACATAGTGACAGGGGTGATAGGATCAGGAGTGTTATCTTTGCCATGGAGCATTGCACAACTTGGATGGATTGTTGGACCATTTTCCATACTCCTTATTGCTTCTTCAACTCTTTACTCTGCTTTTCTTCTATGCAATACTTATCGTTCTCCGAATCCTGAATATGGTCCTCATAGAAGTGCTTCTTATCTTGATGTTGTCAATTTTAATCTAGGAACAGGGAATGGAAGACTCTGTGGCTTTCTTGTGAATATCTGTATATATGGTTTTGGAATTGCCTTTGTCATTACAACTGCTATCAGCTTAAGAGCAATCCAAATCTCAATTTCTCAACACAACAAAGAGAATGAAACACCAAGTGAATTTGCAGATGCATATTATATGCTGATTTTTGGAATTGTCCAAATTGCTCTCTCCCAGATACCAAACTTACATGACATACATTGGCTGTCCGTTGTCGCTGCGATTACATCCTTTGGTTATTGTTTCATAGGAATGGGACTTTCCATCATGCAAATCATAGAAAATGGATATGCTAAGGGTAGTATTGAAGGAATCAGTACCTCTAGTGGAACTGAGAAGTTGTGGTTGGTTTCCCAAGCGCTTGGTGACGTGTCGTTCTCCTATCCTTTCTCGACAATTATGATGGAAATACAGGATACTTTGAAGACGCCTCCACCAGAAAACCAAACCATGAAAAAGGCCTCAACAATATCAGTTGCTATCACGACATTCTTTTACCTCGTTTGTGGATGGGCTGGATATGCTGCCTTTGGTGATAATACACCAGGAAACCTTTTAACAGGGTTCGGTTCCTCCAAATTTTATTGGCTTGTTGGCTTTGCTCATGCTTGTATAGTGGTTCACCTAGTTGGTTCATATCAGGTATACTGCCAGCCCCTTTTTGCTAATGCCGAGAATTGGTTCCGTTTAAATTTCCCTGACAGTGAATTTGTGAATCACACATATACCTTGAAACTCCCATTGCTTCCCGCTTTCAAACTAAATTTTCTCAGCCTGTCATTCAGAACGGCTTATGTTGCATCAACTGTTGTGATTGCAATGATCTTTCCCTACTTCAACCAGATTTTGGGAGTTTTAGGTAGCATAAGCTATTGGCCATTAACCATATATTTTCCAGTGACAGTATACTTGAGTAGGTCTGATACTGATGCATGGACTGCGAAATGGGTTATGCTTCAAGCTTTCAATGTTTTTGGCTTTGTATTTGGATTGTTCACTCTTATTGGATGCATTAGAGGAATAGTAACTGAAAAATTAGGCTAA 1392 0.3958 MMGLDSSDNINTPLLLTQSQSHPIKRTGTLWTAVAHIVTGVIGSGVLSLPWSIAQLGWIVGPFSILLIASSTLYSAFLLCNTYRSPNPEYGPHRSASYLDVVNFNLGTGNGRLCGFLVNICIYGFGIAFVITTAISLRAIQISISQHNKENETPSEFADAYYMLIFGIVQIALSQIPNLHDIHWLSVVAAITSFGYCFIGMGLSIMQIIENGYAKGSIEGISTSSGTEKLWLVSQALGDVSFSYPFSTIMMEIQDTLKTPPPENQTMKKASTISVAITTFFYLVCGWAGYAAFGDNTPGNLLTGFGSSKFYWLVGFAHACIVVHLVGSYQVYCQPLFANAENWFRLNFPDSEFVNHTYTLKLPLLPAFKLNFLSLSFRTAYVASTVVIAMIFPYFNQILGVLGSISYWPLTIYFPVTVYLSRSDTDAWTAKWVMLQAFNVFGFVFGLFTLIGCIRGIVTEKLG* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3473 463 Pfam Transmembrane amino acid transporter protein 26 457 IPR013057 -
Mtr5g3473 463 PANTHER OS05G0424000 PROTEIN-RELATED 2 462 - -
Mtr5g3473 463 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 2 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3473 Mtr-Chr5 43561615 43566109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3473 24 460 Organic Solute Cotransporters AT5G09220 44.773 2.51e-142 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3473 K24917 - gmx:100809376 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3473 5 43561615 43566109 Mtr5g3473 5 43561615 43566109 ECH
Mtr3g1585 3 27664682 27669789 Mtr5g3473 5 43561615 43566109 PCT