Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3471 ATGTTTGGGAGAGGAGCTGTTGGATCATTTTTAAAGCGCAGCAAAGAAGCATTTTTTATTCAGAAGCTCGTAGGGAGGAACACGGCAACGGTTCCTTTCTCTCATCCTGCCATCGAACAACAATCGTTCAAGTTTTTTAACCCTTCCGTTGTTTCCACCCATTTCTTTCGTAATTTCCGATCTCATCCTATCCCGAAGGGTCATCATGTGCCATTCACGAGGAACTTTTCTACGGTAGTGTCTGCTGGGGCCAAACATGAGGAGTTGAAGCTGCTTGTGACAGGAGGTTCTCGCGCACAGAAGGCGGTTGGAATATGGCTATTTGGCTCTGCTGCGTGGGTGTTTAGTATGGTGGTACTTGGGGGTTTAACCAGACTCACTAGATCCGGTCTTTCAATGACTGATTGGAAATTCACGGGTGAGTTCCCTCCTTTGACAGATGAAGCATGGTTGCAGGAGTTTGAAAAATATCAGCAGTCACCAGAATACAAGCGTGTTAACAAAGGGATGAAGATCGAAGAATTCAAGTTCATATATTGGATGGAATATGGACATCGTATGTGGGGGAGGGCACTTGGAATTATGTTTGTTTTACCATATTCATATTTTCTCCATAAGGGGTATATCACATTGAGATTAGGACTGAGACTCTCTGTTTTGTTTGGCCTGGGTGCCGGGCAGGGTCTCATCGGCTGGTGGATGGTTAAAAGTGGTTTAGAGGAACCACCAACTGAATATTCTCAGCCAAGAGTAAGCCCTTATCGTCTCGCAGCTCACCTTACATCAGCATTTGCTATTTACTGCGGTCTCTTTTGGACTGCACTTTCTGTTGTTATGCCTGAACCACCTGCCGAATCACTAACATGGGTCCGTGGGGCAGCTAAAGTGAAGAGACTTGCATTGCCCGTCAGCCTACTTGTTGGTCTTACTGCTGTCTCCGGGGCATTTGTTGCAGGAAATGATGCTGGGCATGCATTTAATACTTTTCCGAAGATGGGGGATACATGGATCCCAGAAGACATTCTTGAAATGAAACCTCTGATTCGAAACTTCTTTGAGAATACATCGACTGTACAGCTCAATCACCGGATCCTTGCAACTGCAACTCTAATTTCGGTGAGTGCCTTATGGCTGTCAACAAGAAAGCTAGACATACATCCTGCAGTGCGATCTGTGATCGGAGGTGTCTTTGGCATGGCATCTCTACAGGTCGCCCTGGGAATTTCGACCCTTCTTTCATATGTACCCGTTTCATTGGGTACTGCGCATCAAGCCGGAGCCTTAACACTTCTGATGTTTATGTTACTGCTTAATCACACTGTTCGAAGGCCATCTTTGTCGCTTCTCAAATCTCTACCTCAGGTTGTCAAGGCAAACTAA 1380 0.458 MFGRGAVGSFLKRSKEAFFIQKLVGRNTATVPFSHPAIEQQSFKFFNPSVVSTHFFRNFRSHPIPKGHHVPFTRNFSTVVSAGAKHEELKLLVTGGSRAQKAVGIWLFGSAAWVFSMVVLGGLTRLTRSGLSMTDWKFTGEFPPLTDEAWLQEFEKYQQSPEYKRVNKGMKIEEFKFIYWMEYGHRMWGRALGIMFVLPYSYFLHKGYITLRLGLRLSVLFGLGAGQGLIGWWMVKSGLEEPPTEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESLTWVRGAAKVKRLALPVSLLVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIPEDILEMKPLIRNFFENTSTVQLNHRILATATLISVSALWLSTRKLDIHPAVRSVIGGVFGMASLQVALGISTLLSYVPVSLGTAHQAGALTLLMFMLLLNHTVRRPSLSLLKSLPQVVKAN* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3471 459 Pfam Cytochrome oxidase assembly protein 105 434 IPR003780 GO:0006784|GO:0016021|GO:0016653
Mtr5g3471 459 Hamap Heme A synthase [ctaA]. 100 444 IPR023754 GO:0006784|GO:0016020|GO:0016653
Mtr5g3471 459 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 71 457 IPR023754 GO:0006784|GO:0016020|GO:0016653
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3471 Mtr-Chr5 43546757 43551372 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3471 K02259 - gmx:100784443 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3471 5 43546757 43551372 Mtr5g3471 5 43546757 43551372 ECH