Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3470 ATGACTGTAGGGGCAGGAATATCTGTTGGTGATGGAAACTTGATGGTGTTAGGGAAGAAGGTTCTGAGTCAGGTTCATGAGAATGTTCTTGTTACTCCTGCTTCTGGTGGTTCTTTGATCAATGGTGCATTCATTGGTGTTTCTTCTGATCAAAAGGGTAGCCGCAGAGTCTTTCCCATTGGCAAGCTTGAGGAGTTGAGATTTATGAGTCTTTTCCGCTTCAAAATGTGGTGGATGACACAGAGAATGGGGAATTGTGGACAAGAAATCCCCTTTGAGACACAGTTCTTGCTTATTGAAGCACATAAGGGTTGTGATATTGAGGGAGGGATCGACAATGGAGAACAAGACCAAGATGGTTCTACCTACGCGGTTTTGTTACCTCTTTTGGAAGGAGATTTCAGGGCTGTTCTTCAGGGGAATGATCAAAATGAAATTGAGATTTGTGTCGAAAGTGGATGTCCTGATGTGGAGGAATTTGATGGGACTCATTTGGTGTTTATTGGGGCTGGATCAGATCCTTATAAGGTCATAACAAATGCTGTCAAGACTGTTGAAAAACACTTGAAGACATTCTGTCATCGCGAGAGAAAGAAGATGCCAGATATGTTGAACTGGTTTGGATGGTGTACATGGGATGCTTTCTACACCAATGTCACTTCAGAGAATGTGAAAGAAGGGTTACAGAGTTTCGAGGAAGGTGGAATTCCTGCTAAGTTTGTCATAATTGATGATGGATGGCAATCTGTTAGCATGGACCCCAATGGTGTTGAATGGAAACATGATTGTGCAGCAAATTTTGCGAACCGCTTAACTCATATCAAAGAGAATCACAAATTCCAGAAAGACGGCAAGGAAGGTCAGCGGATAGAGGACCCTGCCATGGGACTTCACCATATTACCAATGAAATAAAAAAGGAACATGCTATAAAGCATGTGTATGTGTGGCACGCAATAACAGGATATTGGGGTGGTGTTAAACCTGGGATTAGTGGCATGGAACATTATGAGTCAAAGATGGCTTTCCCTATCTCATCTCCTGGAGTCAAGTCTAACCAACCAGATGAAGCTTTAGATACCATAGCAATTAATGGACTCGGCCTTGTTAATCCTGAGAAAGTCTTTCACTTTTATGATGAACTCCACTCATATCTAGCATCTGCTGGTATTGATGGTGTCAAAGTTGATGTTCAGAATATCCTTGAAACTCTTGGAGCCGGACATGGTGGCAGGGTGAAACTTGCAAGGAAATATCATCAGGCATTGGAGGCGTCGATCTCTAGGAACTTTCCTGATAATGGAATCATTTGTTGCATGAGTCACAATACAGACGGATTGTATAGTTCAAAGCGTTCGGCTGTTATTAGAGCATCAGATGATTTCTGGCCAAGAGACCCTGCATCTCACACAATTCACATTGCATCAGTTGCTTACAATACTATTTTCCTTGGTGAATTTATGCAGCCAGATTGGGATATGTTTCATAGTCTACATCCGATGGCTGAATATCATGCTGCTGCAAGAGCAGTTGGAGGATGTCCTATTTATGTCAGTGACAAGCCCGGACACCACGACTTCAATCTTTTGAAGAAGCTTGTACTTCCTGACGGTTCTATATTAAGAGCTAAACTTCCAGGAAGACCAACCAAGGATTGCTTATTTTCTGATCCTGCTAGAGATGGAAAGAGTCTCCTAAAGATATGGAACATGAATGACTATTCTGGAGTTGTTGGGGTATTCAATTGCCAAGGAGCTGGTTGGTGCAAAGTTGGAAAGAAGAACCTTATCCACGACGAGAATCCAGGCACAGTCACTGACATCATTAGGGCTAAAGATATCGACCATTTATCGACAGTGGCAGATGATAAATGGACAGGAGACGCCGTCATATTTTCCCATCTTCGCGGTGAAGTAGTCTATCTTCCAAAGGATGTTTCTATTCCAATTACCATGAAATCCCGAGAATATGAACTTTTTACGATAGTCCCTGTGAAGGAATTACCAAATGGAGTCAAATTTGCGCCTATTGGTTTAATCAAGATGTTCAATTCAGGAGGGGCTGTCAAAGAGTTTAGTTCTGGATTTAACGGAGTTGCAAATGTTTCCATGAAAGTGCGCGGGTGTGGCCTATTTGGTGCTTATTCATCAGCTCAGCCAAAGTTGATTACTGTTGATTCAGAAGAGGTGGAATTCAGTTACGAGGAAGAATCAGGATTGGTGACTATTGATTTGAGTGTGCCGGAGAAAGAGTTATATCAATGGAACATTTCTATTGATTTATAA 2283 0.4201 MTVGAGISVGDGNLMVLGKKVLSQVHENVLVTPASGGSLINGAFIGVSSDQKGSRRVFPIGKLEELRFMSLFRFKMWWMTQRMGNCGQEIPFETQFLLIEAHKGCDIEGGIDNGEQDQDGSTYAVLLPLLEGDFRAVLQGNDQNEIEICVESGCPDVEEFDGTHLVFIGAGSDPYKVITNAVKTVEKHLKTFCHRERKKMPDMLNWFGWCTWDAFYTNVTSENVKEGLQSFEEGGIPAKFVIIDDGWQSVSMDPNGVEWKHDCAANFANRLTHIKENHKFQKDGKEGQRIEDPAMGLHHITNEIKKEHAIKHVYVWHAITGYWGGVKPGISGMEHYESKMAFPISSPGVKSNQPDEALDTIAINGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISRNFPDNGIICCMSHNTDGLYSSKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCPIYVSDKPGHHDFNLLKKLVLPDGSILRAKLPGRPTKDCLFSDPARDGKSLLKIWNMNDYSGVVGVFNCQGAGWCKVGKKNLIHDENPGTVTDIIRAKDIDHLSTVADDKWTGDAVIFSHLRGEVVYLPKDVSIPITMKSREYELFTIVPVKELPNGVKFAPIGLIKMFNSGGAVKEFSSGFNGVANVSMKVRGCGLFGAYSSAQPKLITVDSEEVEFSYEEESGLVTIDLSVPEKELYQWNISIDL* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3470 760 Pfam Raffinose synthase or seed imbibition protein Sip1 7 743 IPR008811 -
Mtr5g3470 760 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 1-RELATED 1 760 - -
Mtr5g3470 760 Gene3D Aldolase class I 203 531 IPR013785 -
Mtr5g3470 760 PANTHER - 1 760 IPR008811 -
Mtr5g3470 760 SUPERFAMILY (Trans)glycosidases 201 532 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3470 Mtr-Chr5 43540426 43544897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3470 1 758 Glycoside Hydrolase AT1G55740 71.579 0.0 1121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3470 K06617 - gmx:100785506 1390.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3470 5 43540426 43544897 Mtr5g3470 5 43540426 43544897 ECH