Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3443 ATGAGCGGCGGCCGCGGTGGTGGTGGTGGCGGGTCTAGGGTTCCGATCCCCAACAATGTACGGAAAACCATCCTCGACATCAGAGAGATCACTGGAAAACAACACACCGACGATGAAATCTTCTCCGTTCTTAAAGAATCAAACATGGATCCCAATGAAACTACTCAAAAGCTTCTCTATTTAGATACTTTTCATGAAGTAAGAAGCAGACGCGACCGCAGAAAAGAAGGATTGAGCAGCAGGGTTTCTGAGGAGTCTAGATCAAAACAACGTGGACCGGGGAGGGGAGCAAGAGGTTTTTCGGGGGGCTATTCCTCAAACTTTCCTGATGGTGGTGGTGGTGGGAGGAACCTTCCTATTCGAAGGGAAAATGGAGTCCATCACATTGCAGAGAGAACTCATGCTTCCTCTACTCAGCCAGATTTACAGAAAAACACTAATGCAGCACCCCAAGCCTCAAGAGGTTCAGCTGTTGCACCCCGTAGTGCTGCAAATCAATCCAATGGGAAGTCTGGTCATGGTTCTTCTGGCCAATCTCTCATAGGTAGTGTTGTTAGTGTCCCACAAAGCAGTTCAGCTTCTAATGACACTGTCAATCAAGAAACTGTGCAACCTCAAGCTGTTGTTGTTGCAGCAACCACATCTCCCACTCAAACCTTTGCCTCAATTACAAGAACTGACCAAGGAAAATCTCTCTCGAGTTCTGATCAACATCAAATTTCTGTACCGGGTGTTTGTTCCTCTTCAGATCCTGTGCTGGCACCATCTATCTCCCAGATTCCTGGTGTTGGCGGTGCTGTCAGTAGGGAAGTAGGGAGTGACCGGATATCTGCTGGGCCAAATCATGTTAAAGGAAACAAACTTGAAGAAGCTGGTGATTTATCAGCATCCGAGAATGATAAGTCCGGGTCCATGAATTCAACAAGCAACCCGAATGCTATACCAAAGTCAAATGAAGTTGAAAGTAACCGGTTATCTGAGCCCTTGCAACTCTCATCGTCTTCATCATTGACTTCCAGTTGCGTTAGCCAACCGCCTCAAGATGTTTCTAAAACAGCCAATGTCAAAGAGGTCTCAACTTCAGAAGCTCCTGTGCAGTCAACTGAGTTGAGGCAACATGTTACTTTTCCAAACCATTTCCAAGTGCCTGAGGCTTTAAAAGGTGGTCTGACATTTGGAAGCTTTGATACTTTTGATCCAAGTGAAAAATCTAGCAGTGTAACTGGTTGTGACAATAGCACTTCTCCCACTACTGAATTTTCTTCAGTGAATGCTGAAACTGTTAATTCAAGCAACCAAAGCGCGCCATTGCCCGAACACGGAGATCATCTTGATCATGCACATTCTTCATCTTATTTAATTAAAGAGGCACTGGCTTCTGAAGGCATATCTATAACTGGTAATGATTCAAAGATTGAGCAGCCAAAGCAGGAGGTATTGTTAACTCCCGAGGGCCATCCAATTCTGACTGTTCAAAGTGCTCAAAACTATGGTTTGAATTTCATGTCTACCATGTTAGGGACTCAGCAAGTTCAATTTGAGGGTAGTGAGCTTCAGGCGCAAGAAACACCACACTTCCCTTCCTTTGTTACTGCAAGTTCTCAGGCTGTGTCTCCCAGCCCAACTCCACCTCTACAGAGCTCTATACCCGTGTCTCCACAGCCCGTTTCTTATTTTAGGCCACCATACCCAGCTAACTTCTTCCCATATGGCCCCTATTACCCCCCAATTTACCTGTCTCCAATGCATCAATTTTTAAGCCACAATGGTTTCCCTCAACAGCCACCAGCTGGAAACATGTATCTACCAGCCGCAGCTGCAGCTGCTGGGATCAAGTTCCCTCTTCCGCAATTCAAGGCTGGAGCGAACTCAGGAAATATGGCTCATATTGGAATTCCTTCGGGATCATATATCACTCCACCTGTTGGATATGCTCCTAGTCCGACTGTGAATACTGGAAGCTCTGCCGGAAATGAAGATACTGCAGTGTCTCAATTGAAAGAAAACCAGATCTATACAACTGGACAACTGAGTGAAGGCTCTGCTGTGTGGATACATGCACCTGGCCAAGATATATCCGGTTTGCAACTTAATTCTCTATATAACCTTGCCCCTCAGGGGCAACATCTCACCTTCCCCCAGACACAGGCTGCTCACGGAGCATTTCCCGGTATCTATCAACCAGGGCAGACAGTTGCTTCACCTTCTACCCTTTTGCAGCAGTCTCAAGCTGTCGCTGGGCCTATTGAAACTGTAGGCCTGCCTCCAGGATCTTATCAGCAGCTACCGCCTTCACAGATCAATTGGAATTCTAATTTTTAG 2322 0.463 MSGGRGGGGGGSRVPIPNNVRKTILDIREITGKQHTDDEIFSVLKESNMDPNETTQKLLYLDTFHEVRSRRDRRKEGLSSRVSEESRSKQRGPGRGARGFSGGYSSNFPDGGGGGRNLPIRRENGVHHIAERTHASSTQPDLQKNTNAAPQASRGSAVAPRSAANQSNGKSGHGSSGQSLIGSVVSVPQSSSASNDTVNQETVQPQAVVVAATTSPTQTFASITRTDQGKSLSSSDQHQISVPGVCSSSDPVLAPSISQIPGVGGAVSREVGSDRISAGPNHVKGNKLEEAGDLSASENDKSGSMNSTSNPNAIPKSNEVESNRLSEPLQLSSSSSLTSSCVSQPPQDVSKTANVKEVSTSEAPVQSTELRQHVTFPNHFQVPEALKGGLTFGSFDTFDPSEKSSSVTGCDNSTSPTTEFSSVNAETVNSSNQSAPLPEHGDHLDHAHSSSYLIKEALASEGISITGNDSKIEQPKQEVLLTPEGHPILTVQSAQNYGLNFMSTMLGTQQVQFEGSELQAQETPHFPSFVTASSQAVSPSPTPPLQSSIPVSPQPVSYFRPPYPANFFPYGPYYPPIYLSPMHQFLSHNGFPQQPPAGNMYLPAAAAAAGIKFPLPQFKAGANSGNMAHIGIPSGSYITPPVGYAPSPTVNTGSSAGNEDTAVSQLKENQIYTTGQLSEGSAVWIHAPGQDISGLQLNSLYNLAPQGQHLTFPQTQAAHGAFPGIYQPGQTVASPSTLLQQSQAVAGPIETVGLPPGSYQQLPPSQINWNSNF* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3443 773 MobiDBLite consensus disorder prediction 297 372 - -
Mtr5g3443 773 MobiDBLite consensus disorder prediction 133 201 - -
Mtr5g3443 773 MobiDBLite consensus disorder prediction 1 20 - -
Mtr5g3443 773 MobiDBLite consensus disorder prediction 220 255 - -
Mtr5g3443 773 MobiDBLite consensus disorder prediction 69 120 - -
Mtr5g3443 773 PANTHER FLOCCULATION PROTEIN (DUF1296) 2 773 IPR044277 -
Mtr5g3443 773 PANTHER GBF-INTERACTING PROTEIN 1-LIKE 2 773 - -
Mtr5g3443 773 SUPERFAMILY UBA-like 16 77 IPR009060 GO:0005515
Mtr5g3443 773 Pfam GBF-interacting protein 1 N-terminal 16 76 IPR009719 -
Mtr5g3443 773 MobiDBLite consensus disorder prediction 220 372 - -
Mtr5g3443 773 MobiDBLite consensus disorder prediction 69 92 - -
Mtr5g3443 773 MobiDBLite consensus disorder prediction 401 437 - -
Mtr5g3443 773 MobiDBLite consensus disorder prediction 401 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3443 Mtr-Chr5 43291732 43299767 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3443 - - gmx:100819602 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3443 5 43291732 43299767 Mtr5g3443 5 43291732 43299767 ECH