Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3442 ATGGGAAGTAACGATTTGAAGTACGAGGTTTCACAAAACGCATACATCAAACTCGTTCTTCACTCTCTCAAACACCCTACATCCGCCGTCAACGGCGTCTTGATCGGCCGCATCTCCTCCTCCAACGACACCGTTGAAATCACCGATGCCGTCCCTCTTTTCCACTCTCAAATCCCTCTTCTTCCTCAATTGGAGATCTCTCTCATTCTGATAGAAGAATACTTTTCTACCAAAGGGTTGAACATAGTTGGTTATTTTCATGCCAATGAGAGGTCTGATGATTTTGAGCTTGGTGGTGTGGCAAAGAACATTGGTGACCATATCTGTCGTTACTTTCCACAAGCTGCTATTCTATTGTTAGATAACAAGAAGCTTGAAGCTTTGAAAAAGAGCAAGAGTAGCAGTGCTATAATGCAGCTTTATGTTAGGGATGCATCTAAGAATTGGAAGTTGGTTCAGTCAGATGCGAACAACCGATTCTCTCTCAAAGAGCCATCAGCAAATGTGATCTTATTGGATTATATTTCATCTGAGAAATGGAATGACATTGTAGATTTTGATGATCACCTTGACGACATAAGCAAGGATTGGCTAAACCCAGGGCTCTTCAACTGA 615 0.4211 MGSNDLKYEVSQNAYIKLVLHSLKHPTSAVNGVLIGRISSSNDTVEITDAVPLFHSQIPLLPQLEISLILIEEYFSTKGLNIVGYFHANERSDDFELGGVAKNIGDHICRYFPQAAILLLDNKKLEALKKSKSSSAIMQLYVRDASKNWKLVQSDANNRFSLKEPSANVILLDYISSEKWNDIVDFDDHLDDISKDWLNPGLFN* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3442 204 PANTHER ER MEMBRANE PROTEIN COMPLEX 2 204 IPR005366 GO:0072546
Mtr5g3442 204 Pfam Uncharacterised protein family (UPF0172) 7 201 IPR005366 GO:0072546
Mtr5g3442 204 ProSiteProfiles MPN domain profile. 8 142 IPR037518 -
Mtr5g3442 204 PANTHER BNAA03G11160D PROTEIN 2 204 - -
Mtr5g3442 204 CDD MPN_UPF0172 10 199 IPR005366 GO:0072546
Mtr5g3442 204 Gene3D Cytidine Deaminase, domain 2 7 95 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3442 K23569 - gmx:100527135 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3442 5 43277741 43280688 Mtr5g3442 5 43277741 43280688 ECH