Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3440 ATGGCAGGGTTGGTCGAAGATACACTCCCTACAAATACTAAGGATCATGATGAATCCAAACTTCCCATTGCAGATGATGACACAGAAGTGGATGATTCTCCTATAGAGCAAGTCAGACTAACAGTGTCAATAACAGACGACCCTACACAACCAGCACTAACATTTAGGACATGGGTTATTGGTTTTGTGTCTTGCATTGCCCTTGCCTTTGTGAACCAATTCTTTGGATTCAGAACCAACCCTCTGTCTATTACTTCTGTCTCAGCACAGATTATTGCTCTCCCAGTTGGAAAACTAATGGCTGCAACACTTCCAACAACAATATATAAAGTTCCCTTCACTAAATGGTCTTTCACATTGAATCCTGGACCATTCAATTTGAAGGAACATGCCCTCATTACCATCTTTGCTAGTGTTGGAGCTGGTGGTGTTTATGCTATTAGCATCATCGACATTGTTAAGGCTTTCTACCACAGGAGTATCAATCCAGTTGCTGCCTTTTTGCTAGCAATAACAACTCAGATGCTTGGTTATGGATGGGCTGGTATTTTCAGAAGGTTCCTTGTGGACTCTCCCTACATGTGGTGGCCTAAAAATCTTGTCCAGGTGTCACTATTCAGGGCATTTCATGAACATGAAAAGAGGCCTAAAGGAGGAAACACTAGGCTGCAATTCTTTTTCCTGGTTTTTGTGGCTAGCTTTGCTTATTACATTATTCCAGGCTACTTTTTCCAATCAATATCAGCCATATCTGTTGTCTGCTTGATATGGAAAAACTCTGTCACTGCTCAGCAGATTGGTTCAGGAATGAGTGGTCTTGGTGTTGGTGCATTTACACTTGATTGGAACACTGTTGCTGGTTTCTTAGAAAGTCCTTTGGCTTATCCTGGTTTTGCCATTGTCAACATCTTGGTTGGATTTGTGTTGTTTATCTATGTTGTGATTCCTATTTCCTATTGGAATAATTTTTATGAGGCCAAAAAGTTTCCCCTCATCACTTCTAGCACATTTGATTCCACTGGTACAAAATATAATATTTCTAGGATTCTTAATGAAGCAACCTTTGAAATTGATATGGATGCTTATAACAATTACAGCAAGCTCTATCTTAGTATCTTATTTGCATTTGATTATGGGTTGAGCTTTGCATCTCTCACTGCCACGGTGTCGCATGTTTTCCTCTTCCATGGAAAAATGATCATTCAGGCGTGGAGGAAGACAACAACTGCGCTAAAAGGACAAGCCGGAGACGTGCATACAAGAATCATGAAGAGAAACTATGAACAAGCCCCTGAGTGGTGGTTCATGACCATTTTGGTTCTTATGATTATTTTGGCCTTGGCGTGTTGTGAAGGCTTTGACAAACAACTCCAACTTCCATGGTGGGGAGTCTTGCTTTCCCTATTAATTGCATTGGTTTTCACTTTGCCAGTTGGTGTCATTCAAGCAACAACCAATCAGCAAGCTGGACTTAATGTGATCACAGAGTTGATCATTGGGTACCTATACCCTGGAAAGCCTCTTGCCAATGTAGCCTTCAAGACTTATGGATACATCAGCATGGCACAGGCACTTAGTTTCCTTCAAGACTTCAAATTAGGTCTCTACATGAAAATTCCTCCAAAATCTATGTTCATAGTACAGTTGGTAGGAACTTTGGTTGCTTCAAGTGTATACTTCGGCACAGCATGGTGGCTTCTAACGACTATTCCACACATATGCGATAAATCAATGTTGCCAGATGGTAGTCCATGGACTTGTCCTGGTGACGAGGTTTTTTACAATGCTTCAATCATATGGGGAATAGTAGGACCAAAAAGGATGTTCACCAAGGATGGAATATACCCTGGATTGAATTGGTTTTTCCTCATCGGTCTACTTGCGCCTGTTCCAGTGTGGCTTCTAGCTCGCAAATACCCAAACCGAAAGTGGATTGAACTCGTCAACATGCCAATTATCATTGCAGGGGCCAAAGGTATACCACCAGCTAGATCAATCAGTTACATTTCATGGGGAGTTGTTGGAATCTTCTTCAATATCTATGTTTACAAAAAATTCAAGGTATGGTGGGCTAGACACACTTACATTCTCTCAGCTGCTTTGGATGCTGGTGTTGCTTTCATGGCTGTGTTGCTCTATTTTCTACTTCAATCTTATGGTATCTTTGGTCCAGCTTGGTGGGGTCTTAAGTCAGATGATCATTGTCCCTTGGCTAATTGCCCTACAGCTCCTGGTATTAAAGCCAAGGGATGCCCTGTCTTTTAA 2265 0.415 MAGLVEDTLPTNTKDHDESKLPIADDDTEVDDSPIEQVRLTVSITDDPTQPALTFRTWVIGFVSCIALAFVNQFFGFRTNPLSITSVSAQIIALPVGKLMAATLPTTIYKVPFTKWSFTLNPGPFNLKEHALITIFASVGAGGVYAISIIDIVKAFYHRSINPVAAFLLAITTQMLGYGWAGIFRRFLVDSPYMWWPKNLVQVSLFRAFHEHEKRPKGGNTRLQFFFLVFVASFAYYIIPGYFFQSISAISVVCLIWKNSVTAQQIGSGMSGLGVGAFTLDWNTVAGFLESPLAYPGFAIVNILVGFVLFIYVVIPISYWNNFYEAKKFPLITSSTFDSTGTKYNISRILNEATFEIDMDAYNNYSKLYLSILFAFDYGLSFASLTATVSHVFLFHGKMIIQAWRKTTTALKGQAGDVHTRIMKRNYEQAPEWWFMTILVLMIILALACCEGFDKQLQLPWWGVLLSLLIALVFTLPVGVIQATTNQQAGLNVITELIIGYLYPGKPLANVAFKTYGYISMAQALSFLQDFKLGLYMKIPPKSMFIVQLVGTLVASSVYFGTAWWLLTTIPHICDKSMLPDGSPWTCPGDEVFYNASIIWGIVGPKRMFTKDGIYPGLNWFFLIGLLAPVPVWLLARKYPNRKWIELVNMPIIIAGAKGIPPARSISYISWGVVGIFFNIYVYKKFKVWWARHTYILSAALDAGVAFMAVLLYFLLQSYGIFGPAWWGLKSDDHCPLANCPTAPGIKAKGCPVF* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3440 754 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 25 753 - -
Mtr5g3440 754 PANTHER ISP4 LIKE PROTEIN 25 753 IPR004648 GO:0055085
Mtr5g3440 754 MobiDBLite consensus disorder prediction 10 27 - -
Mtr5g3440 754 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 37 717 IPR004813 GO:0035673
Mtr5g3440 754 Pfam OPT oligopeptide transporter protein 53 715 IPR004813 GO:0035673
Mtr5g3440 754 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 31 717 IPR004648 GO:0055085
Mtr5g3440 754 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3440 Mtr-Chr5 43263386 43268107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3440 1 754 Organic Solute Cotransporters AT4G26590 65.828 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3440 - - gmx:100776230 1283.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3440 5 43263386 43268107 Mtr5g3440 5 43263386 43268107 ECH