Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3436 ATGATGGGTAACAACAACAGAGAAAGAGAAGAATCTTTAACATTCACAATCCCATCATCTTCCTCTCATTCCTCACCGATCACCGTCTCTGACACACTCGATAGTTACCTCACCGACCCAAGAAGCGCTTCTGGAAGTTTCCAGAACGATGGTGTTCTTTCATCTGGTGATGTTGCCGATGTTGAGTTTGGATTCTCAAGACCTGATTTTCGACAAAGTTCTCTTGTTGGTACTGTTGAGTTGTACGAACGACACGTGTTTCTTTGTTATAAGAATCCCAGGTTTTGGCCTCCTAGGATTGAAGCTGCTGAGTTTGATCGGTTGCCTAGGTTGCTTTATGCTGCTGTTAAAGCTAGGAAGAATCATATGAAGAAGGAGACCCGGTTAACGATATGTGAGGGTCATGATGGGACTGAAACATCTAATGGGGATGTGTTAATCTTTCCTGACATGATCAGATACAGGAGATTGACACATTTTGATGTTGAAACTTTTGTTGAAGAAGTTCTTGTGAAGAATGGAGAGTGGCTACCTGGAACACCTGAAACTCTGAAAGGTTCATATGTTTTTGTGTGTTCACATGGATCACGTGATCGTAGATGTGGGGTTTGTGGACCTGTTTTGGTTAATAGATTCAGGGAAGAAATAGAGTATCATGGTCTACAAGGTAAAGTATTTGTTAGCCCATGCTCGCACATTGGGGGACATAAGTATGCAGGAAATGTCATTATATTTGGATCAAGCATGAATGGAGAAGTCACTGGACATTGGTATGGATATGTTGCCCCAGAGGATGTACCTTTATTGCTTCAACAACATGTCATGAAAGGGGAGATTATAGACTCATTATGGAGGGGTCAGATGGGATTATCAGAAGATGAACAAATACAAAAGCAAGAACAAAGGCTTCTGCTGAGTTGCATAGGAGATTTAGAAGAAAACCCTGTACTGAATGGATCTCTAGACAATTTCACGAGCTGCTGCCAACCAAATGGAGTGAGCTGCTGCCAAGAAAACGGAAACTCTTCCTTTTGTCAGAGTCAGGTGTCAGTGGATGAGAGAATGAGCTCCGATGTCATCGAGACTGAAGCAAAGCTTTCAGCTGATAATAATAAGAGCAGCAAGGCGGCGGTTTCTCGAATCAACAGCGGGAAAGGAGCTTCATGCAGGTCTCGTTCTATGACATCATGGCTTGACGGCTGGGAACAAGAAGATACTTATGCTGCTCTTGCTGTTGTCTGTGCTGCTGTATCGGTCACTATCGCCTATAACTGCTACAAACAATTGACATAG 1293 0.43 MMGNNNREREESLTFTIPSSSSHSSPITVSDTLDSYLTDPRSASGSFQNDGVLSSGDVADVEFGFSRPDFRQSSLVGTVELYERHVFLCYKNPRFWPPRIEAAEFDRLPRLLYAAVKARKNHMKKETRLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVETFVEEVLVKNGEWLPGTPETLKGSYVFVCSHGSRDRRCGVCGPVLVNRFREEIEYHGLQGKVFVSPCSHIGGHKYAGNVIIFGSSMNGEVTGHWYGYVAPEDVPLLLQQHVMKGEIIDSLWRGQMGLSEDEQIQKQEQRLLLSCIGDLEENPVLNGSLDNFTSCCQPNGVSCCQENGNSSFCQSQVSVDERMSSDVIETEAKLSADNNKSSKAAVSRINSGKGASCRSRSMTSWLDGWEQEDTYAALAVVCAAVSVTIAYNCYKQLT* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3436 430 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 58 429 IPR009737 -
Mtr5g3436 430 CDD TRX_Fd_Sucrase 186 288 IPR009737 -
Mtr5g3436 430 SUPERFAMILY Thioredoxin-like 188 290 IPR036249 -
Mtr5g3436 430 MobiDBLite consensus disorder prediction 1 28 - -
Mtr5g3436 430 Gene3D Glutaredoxin 186 286 - -
Mtr5g3436 430 Gene3D Glutaredoxin 82 177 - -
Mtr5g3436 430 PANTHER SUCRASE-LIKE PROTEIN 58 429 - -
Mtr5g3436 430 Pfam Sucrase/ferredoxin-like 75 286 IPR009737 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3436 Mtr-Chr5 43206448 43210475 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3436 - - gmx:100816329 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3436 5 43206448 43210475 Mtr5g3436 5 43206448 43210475 ECH