Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3420 ATGGCAAGCTCCACCTTCTTCTCCTCTGTAGCTATATCATCTCTCAGTCACTCACGAAAACCACTTCAATCAACCTTTCTCCTTTCTTCACCAAACCCTTCTTCTCTTTTCACACTTCCAAAGAAATTCACAAAATCCAACAAACTCAGAACCCTAATTGTATCCAAATCCAATAACAGTGATTCAGCTGATGCCAGTGACCGTTTAATTTCAGCTCTTTGTTACTTCTATCCCTTTTTTGATGGCATTCAATATGGAAAATTTGTAATCACTCAATTTTACCCAATTCAAGCCATTGTTCAACCATTGATTCCTGCAATTAGGGTTTTTAAAAGCTTTCCCTTTAATGGGTTTCTTGTGTTTTTGACACTTTACTTTTTTGTTGTCAGAAATCCTAATTTCAGTAAATATGTCAGGTTCAATACAATGCAAGCTATTGTTCTTGATGTGCTGTTGATTTTTCCTGATCTTTTGGAAAGAGGGTTTAATCCAAGAGGTGGGTTTGGATTGGATTTGTTGATGAGTTTGGATAGCACTGTGTTTTTGTTCTTGTTGGTGTGTTTGATTTATGGCTCTTCTTCTTGTATTTTGGGTCAGCTACCTAGATTGCCTATTGTTGCTGATGCTGCTGATAGGCAAGTTATGTGA 648 0.3704 MASSTFFSSVAISSLSHSRKPLQSTFLLSSPNPSSLFTLPKKFTKSNKLRTLIVSKSNNSDSADASDRLISALCYFYPFFDGIQYGKFVITQFYPIQAIVQPLIPAIRVFKSFPFNGFLVFLTLYFFVVRNPNFSKYVRFNTMQAIVLDVLLIFPDLLERGFNPRGGFGLDLLMSLDSTVFLFLLVCLIYGSSSCILGQLPRLPIVADAADRQVM* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3420 215 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 16 215 IPR005691 -
Mtr5g3420 215 Pfam Chloroplast import apparatus Tic20-like 62 210 IPR005691 -
Mtr5g3420 215 PANTHER PROTEIN TIC 20-V, CHLOROPLASTIC 16 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3420 Mtr-Chr5 43074774 43075802 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3420 - - cam:101513867 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3420 5 43074774 43075802 Mtr5g3420 5 43074774 43075802 ECH