Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3418 ATGGGTGAGGAAGAACCAGTTAATACAGCTTCCAAGACTGACATTAGCATGCTAGGGAACCACCTAGATGACTCGAGTGAAAAGAAGGACCTGGAACCTAAGGGAGGAAAAATCTTTGAGGATAATGCTGTCCAAGATTTGAAAGAGGATGGTATAAAAGCAATGGAAGTTGATAAGAAAGCTGATGGGGAGGAAGTACTAGAAATGGATAAGCTAGCTGATGATGGTGATGTTGTAACAGAAAACGCTATCAAAGCTGGGGATGGGGAAGGAATAAAAGAGGATGAGAAAGTTAACGAAGGGAAAGAAATAAAAGAGGACAAGCAAGCTGATGAAGGAGAAGAACTAAAAGAGGATAAGAAAGACAATGGAGGGGAAGAAAGAAAAGAGGATAAGAAAGTTGATGTCGGGCAAGAGGTAAAAGAGGATAAGAAAGTCAATGAAGGGGGAGATATAAAAGAGGAGAAGAAAGCTGATGAAGGGGAAAAATTGAAAGAGGATAAGAAAGACGATGCAGCGGTAAAAATAAAAGAGGATAAGAAAGTCAATGAAGGGGAAGAATTAAAAGAGGAGAAGAAAGCTGATGAAGGGGAAAAATTGAAAGAGGATAAGAAAGACGATGCAGGGGTAGAAATAATAGAGGATAAGAAAGTCAATGAAGGGGAAGAATTAGAAGAGGAGAAGAAAGCTGAAGGGGAAGAATTAAAAGAGGATAAGAAAGTTGATGCTGGGGATGAAATTGAAGAGGATAAGAAAGATGATAATGGGTTTGAGGATGACAAATTGAGTGAGGAAACTGAGCTTAGTAAAGAAGAGAGAGAAAGCGTTGAAGCTAAGAAGCCTGAATTAGATGCCATGGATGAAGAGAGTATCCTTGAAGGTAAAGACGAGGGCAGTGAAAAGGAGAAAAGTCAAAAAGACAGAGAGGATGATAAGGATAAGGTAGATAATAAGTCAAATGAAGAAAATATCAAAGTTGAGAAGAGATTGAAAAAACGCGGGAAAGGAAAGGTTAATGGGGAGAATGTGAAAAAGAAAATGAAGGAACTGAAGAAGATAGAGGATATCCCTGAAGCCAAAGATGAGAGCATTGAAAAGGAGAGAAGTCGAGATGAGGAGGTGGGCGATAAGGAAAAGGTTGGTGGGGAGAATGTGAAAAAGAAAATGAAGGAACTGAAGGAGGCAGAGCCAACAACTCCTACAACCAACCGTCCTGTACGTGAAAGGAAATCAGTTGAGCGGTTGGTAGAATCATATGACAGAGATGCATCCAAAGAATTTCAAATTGAAGAGGGTCGTGGCACACCTTTAAAAAATATACCCAATGTGGCATTTAAATTATCTAGAAGGAAGGTTGATGATACTCTCAAATTCCTCCACACAATCCTCTTTTGTAGGAGAGGAAAGGCAGCTGTGATCAAGAAAAATATATTAAGGTTTTCTGGTTTTGTGTGGCATGAAAATGAGGAAAAGCAAATGATTAAAGTAAAAGAAAAATTTGACAAATGTAACAAAGAGAAGTTGCTGGAATTCTCTGATCTGCTTGACGTACCAGTTGGCAATGCAAATACAAGGAAGGAAGATATTATTGCAAAGCTAATAGACTTTCTGGTTGCTCCTCAAGTCACAAAAAGTGTATTACTTGCAGAACAAGAAAAGTCAGCTAAAGAAAAGCGCATAGCAAAACAAGGCTCAACGGGATCTGGAACACCAACGTCAAGACGTTCTGCTAAGAGTCGGAAGAAAATTGAAGATTCTTCAATAGCAGAGAAGAAAAAGACTGCAACTGACACAGAAAGTGAGTCTGAGAAAGATGAAGAAAACAAAGAGGAAAATGAAATCGATGTTTCTGACAAATCTGAAGATGAGAAGCCGATTAAAGGAAAAAAGCACATAGCAAAACAAGGTTCATCAAGATCTGGAACAGCATCGTCTAGACGTTCTGCTAAGAGTCAGAAGAAAAATGAAGATTTATTTGTAGCAAAGAAAAGAAAGACTACAACTGACATAGAAAGTGAGTCTGAGAAAGAAGACAATAAAGAAGAAAATGAAAACAATGTTTCTGAAAAATCTGAAGATGAAAAGTCGATTAAAGGAAAAAAGCGCAAGCTCATAGCAAAACAAGGTTCATCGAGATCTGGAATGGCCACGTCAAGACGTTCTGCTAAGAGTCGGAAGAAAAATGAAGATTCTTCCGTAGCAGAGGAGAGAAAAGGATCAACTGACACAGAAGATGAGTCTGAGGAAGAACAGAAGGATGAAAAAAAAGTAGAAGACAATGAAAACACTGTTCCTGACAAATCCAAGGATGAAAAGCCCAAGAAATCTGAAAGTGGGGATAAAAATGATTCTGATAATGAATCTGAAGATGAGAAGAAAGTGAGTGAAAGGAGTAAAACATCTTCCAGAAGGAAAGAATCCGCTGCACAAAGCAAAGCAAAGAAAGCAACAGATAAAACAAAACCTCGCTCGGCACAAAAGCAAACTTCTAAGAAGCCATTGTCTACACACTCTGCATCTGATCATGGTGATAGTGATGGAAGTCCCAAGGTCTTTTCAAGGAAGAAGAAAAATGAAAAACAAGGAAAGCAGAAGACCTCAACTCTCACCAAGTCTTCCTCCAAAGACAAAGCAGAAGAAAAGGTTACCGGCAGAAAGATCAAGAATAAAGAGAAGTCAGACCCGAGTGATGATCAGTTACGCAAAGCAATATGTGTTATTTTTAAAAAAGTCGACTTCAATACTGCTACATTTGCCGACATTTTGAAGCTACTCGGTAAGCAATTTGACGTGGATCTCACCCCAAGAAAGGCATCTGTAAAGACTATTATTCAGCAAGAGCTGGCAAAACTAGCTGAAGAAGATGAAGAAAGAGAACAGAGAGAGCGGCGTGGTGATGCCTGA 2904 0.3902 MGEEEPVNTASKTDISMLGNHLDDSSEKKDLEPKGGKIFEDNAVQDLKEDGIKAMEVDKKADGEEVLEMDKLADDGDVVTENAIKAGDGEGIKEDEKVNEGKEIKEDKQADEGEELKEDKKDNGGEERKEDKKVDVGQEVKEDKKVNEGGDIKEEKKADEGEKLKEDKKDDAAVKIKEDKKVNEGEELKEEKKADEGEKLKEDKKDDAGVEIIEDKKVNEGEELEEEKKAEGEELKEDKKVDAGDEIEEDKKDDNGFEDDKLSEETELSKEERESVEAKKPELDAMDEESILEGKDEGSEKEKSQKDREDDKDKVDNKSNEENIKVEKRLKKRGKGKVNGENVKKKMKELKKIEDIPEAKDESIEKERSRDEEVGDKEKVGGENVKKKMKELKEAEPTTPTTNRPVRERKSVERLVESYDRDASKEFQIEEGRGTPLKNIPNVAFKLSRRKVDDTLKFLHTILFCRRGKAAVIKKNILRFSGFVWHENEEKQMIKVKEKFDKCNKEKLLEFSDLLDVPVGNANTRKEDIIAKLIDFLVAPQVTKSVLLAEQEKSAKEKRIAKQGSTGSGTPTSRRSAKSRKKIEDSSIAEKKKTATDTESESEKDEENKEENEIDVSDKSEDEKPIKGKKHIAKQGSSRSGTASSRRSAKSQKKNEDLFVAKKRKTTTDIESESEKEDNKEENENNVSEKSEDEKSIKGKKRKLIAKQGSSRSGMATSRRSAKSRKKNEDSSVAEERKGSTDTEDESEEEQKDEKKVEDNENTVPDKSKDEKPKKSESGDKNDSDNESEDEKKVSERSKTSSRRKESAAQSKAKKATDKTKPRSAQKQTSKKPLSTHSASDHGDSDGSPKVFSRKKKNEKQGKQKTSTLTKSSSKDKAEEKVTGRKIKNKEKSDPSDDQLRKAICVIFKKVDFNTATFADILKLLGKQFDVDLTPRKASVKTIIQQELAKLAEEDEEREQRERRGDA* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3418 967 Gene3D - 886 950 - -
Mtr5g3418 967 MobiDBLite consensus disorder prediction 613 630 - -
Mtr5g3418 967 MobiDBLite consensus disorder prediction 722 745 - -
Mtr5g3418 967 MobiDBLite consensus disorder prediction 649 700 - -
Mtr5g3418 967 MobiDBLite consensus disorder prediction 1 43 - -
Mtr5g3418 967 Pfam DEK C terminal domain 895 948 IPR014876 -
Mtr5g3418 967 MobiDBLite consensus disorder prediction 21 43 - -
Mtr5g3418 967 MobiDBLite consensus disorder prediction 553 899 - -
Mtr5g3418 967 Coils Coil 944 964 - -
Mtr5g3418 967 Coils Coil 210 241 - -
Mtr5g3418 967 MobiDBLite consensus disorder prediction 753 825 - -
Mtr5g3418 967 MobiDBLite consensus disorder prediction 69 409 - -
Mtr5g3418 967 MobiDBLite consensus disorder prediction 837 855 - -
Mtr5g3418 967 Coils Coil 301 321 - -
Mtr5g3418 967 Coils Coil 486 506 - -
Mtr5g3418 967 PANTHER PROTEIN DEK 268 625 - -
Mtr5g3418 967 PANTHER PROTEIN DEK 691 961 - -
Mtr5g3418 967 SUPERFAMILY DEK C-terminal domain 888 948 - -
Mtr5g3418 967 MobiDBLite consensus disorder prediction 254 397 - -
Mtr5g3418 967 MobiDBLite consensus disorder prediction 870 899 - -
Mtr5g3418 967 PANTHER DEK PROTEIN 691 961 IPR044198 GO:0003677|GO:0006325
Mtr5g3418 967 PANTHER DEK PROTEIN 268 625 IPR044198 GO:0003677|GO:0006325
Mtr5g3418 967 MobiDBLite consensus disorder prediction 577 602 - -
Mtr5g3418 967 MobiDBLite consensus disorder prediction 87 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3418 Mtr-Chr5 43038103 43045492 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3418 K17046 - gmx:100817467 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3418 5 43038103 43045492 Mtr5g3418 5 43038103 43045492 ECH