Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3414 ATGGCGCCTGTGGCAGCGAGAAACGCCGGCGCTGTTGGTGTCGGAACTGCCATCTTCGTCTCCCTCGTCGTTGCATATTTCTTCTGCGACCGTCTCTGCAATCCATCTAAGAAGAAGAAGAAGAAGAAATCAAAGAATGGAATCATTGACGCCATTGGTAACACTCCTTTGATTAGAATCAATAGTCTCTCTGATGCCACTGGTTGCGAAATTCTTGGCAAGTGTGAGTTTTTGAATCCTGGAGGGAGTGTTAAAGATCGTGTTGCAGTTCAAATTATTGAAGAGGCTTTGGAATCTGGGCAGCTACGACGAGGTGGAATAGTTACTGAAGGGAGTGCTGGAAGCACTGCAATTAGCATTGCTACAGTTGCTCCTGCTTATGGATGCAAATGTCATGTGGTTATTCCAGATGATGCTGCCATTGAGAAGTCTCAAATTATTGAAGCACTTGGAGCAACTGTTGAAAGAGTACGACCAGTGTCAATCACACACAAAGACCATTTTGTCAATATTGCAAGAAGACGGGCATCTGAAGCAAATGAATTTGCATTTAAGCATAGAAAATCACAACCGAAGGGCACGGACTCGCAGCAAATAAATGGTTGTAAATCTGATGGGCACAAGCACAGCACACTCTTTCCTAATGATTGTCAAGGCGGTTTCTTTGCTGATCAGTTTGAGAACCTTGCAAACTTCAGGGCCCATTACGAAGGTACAGGACCTGAGATTTGGGAACAGACAAATGGAAATTTAGATGCATTTGTTGCAGCAGCAGGCACTGGTGGTACTGTGGCTGGTGTTTCCAAGTTTCTTCAGGAAAAGAATCCAAACATCAAGTGTTACCTCATAGATCCTCCGGGTTCTGGCTTGTTTAATAAGGTAATGAGGGGGGTAATGTACACCAAAGAGGAGGCAGAAGGACGAAGACTTAAGAATCCATTTGACACTATAACAGAAGGAATCGGAATTAACAGGGTAACGAAGAATTTTGCAGAGGCAAAACTTGATGGGGCCTTTAGAGGAACAGATATGGAGGCCGTTGAAATGGCCAGGTTTCTCGTGAAGAATGATGGGCTTTTCCTTGGGAGTTCTTCTGCGATGAACTGTGTTGGAGCAGTTAGAATAGCGCAATCAATTGGCCCTGGTCACACAATTGTAACCATTCTTTGTGATAGTGGAATGAGACATTTGAGCAAGTTTTATAATGCTGAATACTTGTCTCAGCTTGGTTTGACACCTAAAGCAACTGGATTAGAGTTCTTGGGTATCAAATGA 1275 0.4376 MAPVAARNAGAVGVGTAIFVSLVVAYFFCDRLCNPSKKKKKKKSKNGIIDAIGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVQIIEEALESGQLRRGGIVTEGSAGSTAISIATVAPAYGCKCHVVIPDDAAIEKSQIIEALGATVERVRPVSITHKDHFVNIARRRASEANEFAFKHRKSQPKGTDSQQINGCKSDGHKHSTLFPNDCQGGFFADQFENLANFRAHYEGTGPEIWEQTNGNLDAFVAAAGTGGTVAGVSKFLQEKNPNIKCYLIDPPGSGLFNKVMRGVMYTKEEAEGRRLKNPFDTITEGIGINRVTKNFAEAKLDGAFRGTDMEAVEMARFLVKNDGLFLGSSSAMNCVGAVRIAQSIGPGHTIVTILCDSGMRHLSKFYNAEYLSQLGLTPKATGLEFLGIK* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3414 424 Gene3D - 52 397 IPR036052 -
Mtr5g3414 424 PANTHER CYSTATHIONINE BETA-SYNTHASE 34 423 - -
Mtr5g3414 424 CDD CBS_like 53 398 - -
Mtr5g3414 424 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 74 92 IPR001216 GO:0006535
Mtr5g3414 424 PANTHER CYSTEINE SYNTHASE-RELATED 34 423 - -
Mtr5g3414 424 Gene3D - 82 232 IPR036052 -
Mtr5g3414 424 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 26 405 IPR036052 -
Mtr5g3414 424 Pfam Pyridoxal-phosphate dependent enzyme 50 391 IPR001926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3414 Mtr-Chr5 43011388 43014949 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3414 45 398 Miscellaneous Gene Families AT3G04940 28.090 1.71e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3414 K01738 - gmx:100799081 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3414 5 43011388 43014949 Mtr5g3414 5 43011388 43014949 ECH