Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3406 ATGTCTCTCCAAATTCTCCGATCTCGATTCTTCTCCGTCGCAGCATCATCGTCTTCGAAGCCATTCCGCTTTTCCAAAGTCACTCCTCAACCTTCTTCACGTTTCTCATCCACCGCCGCTCCTGCTACTCCTCATCCTCCTCCTTCCGCCACTCCTTCTCCACCTCCTCCTTCTTCCGCCACTCCTCCACCTTCTTCCGCCACTCCTCCTCCACCTCCTCCTTTTTCTTCCACCGCTTCCCCTAACCGCTGGAACTTCCTCAAATACGCCGCCATCGGTGCCTTAACCGGAACCACCGCCGTTGCCGGTTACGCCTCTTACGCTTATAGTACGGACGAAATTGATGAGAAAACGAAGTTGTTTCGTGATTCGACTAAGTACTCTCCACCTGATGGAGCTACTTCTCTCGATAAATTTCAAGGGATGGTATACTCAACTGCAGTGACAGTGCCTGCTAAAGCAGTAGAGCTTTATTTGGATGCAAGAAGGTTTATTGAAGAACATGTTAAGGGTTATACAGAACCATACACGGACAAGCTCCTTCCAGATTTGCTTCCTCAGGAGCAACATGTGTTCACACTTGTTCTAGATCTCAATGAAACATTGATTCACTACATTTGGACGCGAGATACAAGCTGGCAGACTTTTAAAAGACCTGGAGTTGATGCCTTCTTGGAACATCTAGCTCAGTTCTTTGAAATAGTGGTGTATACAGATGAACAGAATATGTTTGTAGACCCTGTTATAGAAAGGCTGGATCCTAAGCACTGCATTAGGTACAGGCTCTCGAGACCTGCTACTAAGTATCAGGATGGGAAACACTATAGAGATCTTTCAAAACTAAACAGGAATCCTGCAAAAGTTATGTACTTAAGTGGCCATGCTTTAGAAAGTTGCCTACAACCTGAGAACTGTGTCCCTATTAAGCCATGGGTGCAGACTGATAAAGATGATACAGCTCTTGTGGATTTCATACCATTCCTTGAGTTTGTTGCCCGTACTAGCCCGGCTGATATAAGACCAGTGCTGCAGTCTTACCAAGGATGTGATATTCCGAGTGAATTCCTCAGGCGTTTGAAATTGCATAAGGAGAAAACTGGAGGACAGAGACGCCTCTGGAAGTAA 1125 0.4613 MSLQILRSRFFSVAASSSSKPFRFSKVTPQPSSRFSSTAAPATPHPPPSATPSPPPPSSATPPPSSATPPPPPPFSSTASPNRWNFLKYAAIGALTGTTAVAGYASYAYSTDEIDEKTKLFRDSTKYSPPDGATSLDKFQGMVYSTAVTVPAKAVELYLDARRFIEEHVKGYTEPYTDKLLPDLLPQEQHVFTLVLDLNETLIHYIWTRDTSWQTFKRPGVDAFLEHLAQFFEIVVYTDEQNMFVDPVIERLDPKHCIRYRLSRPATKYQDGKHYRDLSKLNRNPAKVMYLSGHALESCLQPENCVPIKPWVQTDKDDTALVDFIPFLEFVARTSPADIRPVLQSYQGCDIPSEFLRRLKLHKEKTGGQRRLWK* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3406 374 PANTHER OS05G0513200 PROTEIN 10 363 - -
Mtr5g3406 374 SMART forpap2 190 318 IPR004274 -
Mtr5g3406 374 Gene3D - 177 360 IPR023214 -
Mtr5g3406 374 ProSiteProfiles FCP1 homology domain profile. 187 331 IPR004274 -
Mtr5g3406 374 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 10 363 - -
Mtr5g3406 374 MobiDBLite consensus disorder prediction 41 78 - -
Mtr5g3406 374 CDD HAD_FCP1-like 192 308 - -
Mtr5g3406 374 SUPERFAMILY HAD-like 179 344 IPR036412 -
Mtr5g3406 374 MobiDBLite consensus disorder prediction 13 40 - -
Mtr5g3406 374 MobiDBLite consensus disorder prediction 13 78 - -
Mtr5g3406 374 Pfam NLI interacting factor-like phosphatase 193 340 IPR004274 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3406 K17496 - gmx:100803155 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3406 5 42942547 42948670 Mtr5g3406 5 42942547 42948670 ECH