Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3367 ATGACACTCGAATCATGGGCTCTGGGTCATCGAGTTTTCAATTCGGGTTCGAAATTGTTTTACCCTGTGCATGAGAATCGTACAAAGAGAATGCCAATGAAGGTTTTGGGTACAAATGGTAGATACCCTTTTCCTATTGTGTCAAATTGTGTTGGTCCTTTCACTTGTAAAAGCTTTCATCTTTCAAGTTATGGAAAAAATTTGAAGTTAGTTGGTGGAGCTAGCTTGAAAGTGAAGTGTATTGGTAGTGGTAGTGATAGTGATTGTTTACGAGCGAAAACCGATGTTTCCGATGCTAATTTGAAGTTTATAAATGAAGTTTTAGTGAAGAGAGGAATTATTTTGGCTGCTGCTGTTTGTGGGGTGTTGGTGTTTGGATGCCCTAAAGTTTTGGCTACCGAAGGTGTGGTGAATGCTGGATATGGTGTTATTGGAAAGTGTATACTTTTGCTTAAGAGTACTTGGCCGACAGTGTTGCAAATTCTTCGTTTGTTTAAGGAACAAGGGCTGTTATTGGCTTTGCTTTTGGGTCTTTCGGCTTTTTTCTCTCTGGCAGAGACATCGATTACTACACTTTGGCCTTGGAAGGTTCGTGAGTTGGCTGAAAAGGAGTCTGAAAATGGCGTCTTCAGACTACTCCGAAGTGATGTTACTCGATTCCTCACAACCATACTTATTGGCACAACTGTGGTAAATATTGCAGCAACTGCTCTGGTCACAGAAGCTGCAACTGCAGCATTCGGCGAAGCTGGTGTCAGCGCAGCAACAGGAGTGATGACGGTTGCCATTTTGCTTCTCACTGAAATCACTCCAAAAAGCATCGCGGTTCATAATGCTACAGAGGTGGCTCGGTTTGTGGTCAGGCCAGTGGCATGGCTTTCTCTGGTACTGTATCCTGCAGGAAGAATTGTTACCTTTCTTTCAATGGGGATGCTTAAATTGCTTGGCTTAAAAGGAAGTAGTGAGCCATATGTAACTGAAGAGGAGCTAAAACTGATGCTAAGGGGTGCAGAATTAAGTGGAGCAATAGAAGAGGAAGAACAGGATATGATCGAAAATGTGTTGGAGATAAAAGACACACATGTCAGAGAAGTTATGACGCCTCTTGTTGATGTTGTTGCAATTGATGCAAGTTCAAGCCTTGTAGATTTTCATCACTTGTGGGTTACACATCAATACTCAAGGGTTCCTGTTTTTGAGCAACGTGTTGATAATATAATGGGTATAGCATATGCGATGGATCTGCTGGATTATGTCCAAAAGGGAGAAACTCTAGAAAGCATCACAGTTGGAGATTTGGCTCACAAACCTGCATATTTTGTACCTGATTCAATGTCTGTTTGGAATCTTCTTAGAGAATTTCGAATCAGGAAGGTTCACATGGCTGTCGTTCTTAATGAGTATGGTGGAACTGTTGGGCTTGTAACTCTTGAAGATGTCGTTGAAGAAATTGTTGGTGAAATATTTGATGAAAATGACTCAAAGGAGGAAATACAAAAGAAAACCGGCTACATAGTAATGCGAGCTGAGGGTGTGTTTGACGTGGATGCTAACACATCCATTGATCAACTCTCAGAAGACTTGAACATTAAGATGCCAGAGGGTCACCAATATGAGACGGTATCAGGCTTTGTATGTGAAGCCTTTGGATACATTCCAAGGACAGGAGAAAGCATCAAGTTAGTTCTTGAAAGGGATGACGAAGATGATGATGATGACACCAATGGTGACCACCAAGAACCGAAAGAGAAGAAACATATTTTCAAACTTGAGATACTAGCAGGGAATGCGAGAAAGGTGAGTGCTGTTCGGTTTGAAAGACTACATAGTGGCGACGAAATGTTGGAAGCGAAAGAAGTAACACGAATGTTCCCAAAAATTGTGAAAAGAAAATGGAACAGTGGTGAGGAATCTGAGAATGATGCAGAGTATGATGGATATACATTTCCAAAGAGACCACATGAAGACATTTCTAATGAATATGTAGTTGATCAGGAAAATTCTCATAGTAATTATTAA 2019 0.4101 MTLESWALGHRVFNSGSKLFYPVHENRTKRMPMKVLGTNGRYPFPIVSNCVGPFTCKSFHLSSYGKNLKLVGGASLKVKCIGSGSDSDCLRAKTDVSDANLKFINEVLVKRGIILAAAVCGVLVFGCPKVLATEGVVNAGYGVIGKCILLLKSTWPTVLQILRLFKEQGLLLALLLGLSAFFSLAETSITTLWPWKVRELAEKESENGVFRLLRSDVTRFLTTILIGTTVVNIAATALVTEAATAAFGEAGVSAATGVMTVAILLLTEITPKSIAVHNATEVARFVVRPVAWLSLVLYPAGRIVTFLSMGMLKLLGLKGSSEPYVTEEELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASSSLVDFHHLWVTHQYSRVPVFEQRVDNIMGIAYAMDLLDYVQKGETLESITVGDLAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGLVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRAEGVFDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGESIKLVLERDDEDDDDDTNGDHQEPKEKKHIFKLEILAGNARKVSAVRFERLHSGDEMLEAKEVTRMFPKIVKRKWNSGEESENDAEYDGYTFPKRPHEDISNEYVVDQENSHSNY* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3367 672 SUPERFAMILY FAD-binding/transporter-associated domain-like 504 610 IPR036318 GO:0050660
Mtr5g3367 672 ProSiteProfiles CBS domain profile. 366 425 IPR000644 -
Mtr5g3367 672 Pfam CBS domain 430 485 IPR000644 -
Mtr5g3367 672 Pfam CBS domain 362 420 IPR000644 -
Mtr5g3367 672 ProSiteProfiles CBS domain profile. 434 491 IPR000644 -
Mtr5g3367 672 MobiDBLite consensus disorder prediction 565 584 - -
Mtr5g3367 672 SUPERFAMILY CBS-domain pair 349 488 IPR046342 -
Mtr5g3367 672 MobiDBLite consensus disorder prediction 632 672 - -
Mtr5g3367 672 CDD CBS_pair_CorC_HlyC_assoc 361 482 IPR044751 -
Mtr5g3367 672 Gene3D - 341 496 IPR046342 -
Mtr5g3367 672 Gene3D - 503 605 IPR016169 -
Mtr5g3367 672 PANTHER BNAC03G73630D PROTEIN 86 668 - -
Mtr5g3367 672 MobiDBLite consensus disorder prediction 632 662 - -
Mtr5g3367 672 Pfam Cyclin M transmembrane N-terminal domain 171 347 IPR002550 -
Mtr5g3367 672 Pfam Transporter associated domain 507 608 IPR005170 -
Mtr5g3367 672 ProSiteProfiles CNNM transmembrane domain profile. 161 347 IPR002550 -
Mtr5g3367 672 PANTHER HEMOLYSIN-RELATED 86 668 - -
Mtr5g3367 672 SMART CorC_HlyC_2 506 609 IPR005170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3367 Mtr-Chr5 42584223 42592222 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3367 - - mtr:MTR_5g094740 1265.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3367 5 42584223 42592222 Mtr5g3367 5 42584223 42592222 ECH